RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	IGKV1D-8	A0A087WSZ0	117 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	TMEM235	A6NFC5	223 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	NPIPB5	A8MRT5	1133 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	CYB5B	O43169	146 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	RBMXL2	O75526	392 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	OR2C1	O95371	312 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	IGHV3-23	P01764	117 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	HLA-A	P01891	365 aa	Known RBP	11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	HLA-DQB1	P01920	261 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	CD7	P09564	240 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	MRGPRG-AS1	Q2M3A8	158 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	DEFB114	Q30KQ6	69 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	ANKRD55	Q3KP44	614 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	ZNF57	Q68EA5	555 aa	Predicted RBP	11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	CLEC19A	Q6UXS0	136 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	ZNF66	Q6ZN08	573 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	OR52B4	Q8NGK2	314 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	HIPK2	Q9H2X6	1198 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	DAPK2	Q9UIK4	370 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	ANXA10	Q9UJ72	324 aa		11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	ELF5	Q9UKW6	265 aa	Predicted RBP	11.11	□□□□□ -0.63
TARDBP-231	ENST00000639599	STAB2	Q8WWQ8	2551 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	LGALS9	O00182	355 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	RPL8	P62917	257 aa	Known RBP	11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	CATR1	Q13166	79 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	MFSD4A	Q8N468	514 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	SECTM1	Q8WVN6	248 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	CXorf58	Q96LI9	332 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	SLC2A9	Q9NRM0	540 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	SSR3	Q9UNL2	185 aa		11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	RRP15	Q9Y3B9	282 aa	Known RBP	11.1	□□□□□ -0.63
TARDBP-231	ENST00000639599	TEX22	C9J3V5	150 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	TNFSF12	O43508	249 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	PSMB6	P28072	239 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	MECP2	P51608	486 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	RPL30	P62888	115 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	TPRA1	Q86W33	373 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	GPHB5	Q86YW7	130 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	OR4A5	Q8NH83	315 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	TMEM167A	Q8TBQ9	72 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	FCGR1B	Q92637	280 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	WDR89	Q96FK6	387 aa	Predicted RBP	11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	WFDC10A	Q9H1F0	79 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	THYN1	Q9P016	225 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599		S4R3C0	116 aa		11.09	□□□□□ -0.63
TARDBP-231	ENST00000639599	TRBV7-1	A0A0A6YYK4	115 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	IGKV1D-13	A0A0B4J2D9	117 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	ZNF785	A8K8V0	405 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	MRPS14	O60783	128 aa	Known RBP	11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	REG1A	P05451	166 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	IGKV1-13	P0DP09	117 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	HLA-G	P17693	338 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	CBLN1	P23435	193 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	GABARAPL2	P60520	117 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	PUSL1	Q8N0Z8	303 aa	Known RBP	11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	LGALS14	Q8TCE9	139 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	CACNG8	Q8WXS5	425 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	GGTLC1	Q9BX51	225 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	COMMD5	Q9GZQ3	224 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599		Q9H521	79 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	ZC4H2	Q9NQZ6	224 aa		11.08	□□□□□ -0.64
TARDBP-231	ENST00000639599	RBMY1B	A6NDE4	496 aa	Known RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	RBMY1E	A6NEQ0	496 aa	Known RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	SCAF4	O95104	1147 aa	Known RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	NDUFB8	O95169	186 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	IL6R	P08887	468 aa	Predicted RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	RBMY1D	P0C7P1	496 aa	Known RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	ZNF735	P0CB33	412 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	AREG	P15514	252 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	FCGR2C	P31995	323 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	SFXN4	Q6P4A7	337 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	C19orf35	Q6ZS72	473 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	SLC38A6	Q8IZM9	456 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	SPAG16	Q8N0X2	631 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	UXS1	Q8NBZ7	420 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	BEST4	Q8NFU0	473 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	OR13F1	Q8NGS4	319 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	TXNL4B	Q9NX01	149 aa	Known RBP	11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	RHBDL2	Q9NX52	303 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	RAB26	Q9ULW5	256 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	SELENOK	Q9Y6D0	94 aa		11.07	□□□□□ -0.64
TARDBP-231	ENST00000639599	TRAV18	A0A075B6X5	111 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	CRYGC	P07315	174 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	GPR183	P32249	361 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	FXYD4	P59646	89 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	ERVK-16	P61578	105 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	TIMM50	Q3ZCQ8	353 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	AADACL3	Q5VUY0	350 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	PLET1	Q6UQ28	207 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	BTNL8	Q6UX41	500 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	TMEM61	Q8N0U2	210 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	ZBTB34	Q8NCN2	500 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	DMBX1	Q8NFW5	382 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	OR1L6	Q8NGR2	347 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	BORCS5	Q969J3	196 aa		11.06	□□□□□ -0.64
TARDBP-231	ENST00000639599	MARC2	Q969Z3	335 aa		11.06	□□□□□ -0.64

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