RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 HIST1H1BP16401 226 aaKnown RBP12.13□□□□□ -0.47
SCARB2-208ENST00000638372 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 SPRR3Q9UBC9 169 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 TSC2P49815 1807 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 ARL14EPLP0DKL9 152 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 TMEM208Q9BTX3 173 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 MYLKQ15746 1914 aa12.13□□□□□ -0.47
SCARB2-208ENST00000638372 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 BMI1P35226 326 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 NPIPB3Q92617 1050 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 P2RX4Q99571 388 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PGPA6NDG6 321 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 M0R2Z0 102 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 CRYGSP22914 178 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PLAURQ03405 335 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 Q0VFX4 171 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 WFDC3Q8IUB2 231 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PNKDQ8N490 385 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 RABAC1Q9UI14 185 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 H0YIZ8 118 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 DLL1O00548 723 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 C1orf162Q8NEQ5 155 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 RCC1LQ96I51 464 aaKnown RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PITPNC1Q9UKF7 332 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-208ENST00000638372 CLEC2AQ6UVW9 174 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 LRP11Q86VZ4 500 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 OR5R1Q8NH85 324 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
SCARB2-208ENST00000638372 ZNF98A6NK75 572 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 ZGRF1Q86YA3 2104 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-208ENST00000638372 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 NHLRC2Q8NBF2 726 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 FOXF2Q12947 444 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 TMEM183BQ1AE95 376 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
SCARB2-208ENST00000638372 IQCF6A8MYZ5 107 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 TCAPO15273 167 aa12.11□□□□□ -0.47
SCARB2-208ENST00000638372 CRYBB3P26998 211 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 SMUG1Q53HV7 270 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 DNAJC4Q9NNZ3 241 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 BMPR1BO00238 502 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 RRHO14718 337 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 PTBP3O95758 552 aaKnown RBP12.1□□□□□ -0.47
SCARB2-208ENST00000638372 ZNF343Q6P1L6 599 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 ANAPC1Q9H1A4 1944 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 TRAV24A0A0B4J272 114 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 B9A039 149 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 CA2P00918 260 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 COX19Q49B96 90 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 TMEM186Q96B77 213 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 CLEC7AQ9BXN2 247 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 PARLQ9H300 379 aa12.1□□□□□ -0.47
SCARB2-208ENST00000638372 G0S2P27469 103 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 PRB3Q04118 309 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-208ENST00000638372 BMPERQ8N8U9 685 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 SNRNP40Q96DI7 357 aaKnown RBP12.09□□□□□ -0.47
SCARB2-208ENST00000638372 RBM14Q96PK6 669 aaKnown RBP12.09□□□□□ -0.47
SCARB2-208ENST00000638372 TGIF2-C20orf24A0A0A6YYL0 155 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 APOBEC3AP31941 199 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-208ENST00000638372 UNQ5815/PRO19632Q6UWF5 114 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 SEMA5BQ9P283 1151 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 TRBV6-7A0A0A0MS04 114 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 PRSS1P07477 247 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 C8orf88P0DMB2 117 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 NUBP1P53384 320 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 FXYD3Q14802 87 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 IBA57Q5T440 356 aaKnown RBP12.09□□□□□ -0.47
SCARB2-208ENST00000638372 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 CORTO00230 105 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 LIPFP07098 398 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 SMIM6P0DI80 62 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 C1QTNF12Q5T7M4 302 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 ELOVL5Q9NYP7 299 aa12.09□□□□□ -0.47
SCARB2-208ENST00000638372 PF4V1P10720 104 aa12.08□□□□□ -0.47
SCARB2-208ENST00000638372 CCL3L1P16619 93 aa12.08□□□□□ -0.47
SCARB2-208ENST00000638372 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms