RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PAX1P15863 534 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 KLK13Q9UKR3 277 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
UBE3A-228ENST00000638155 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 PHF3Q92576 2039 aaKnown RBP11.33□□□□□ -0.6
UBE3A-228ENST00000638155 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 CCL19Q99731 98 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 NKX2-2O95096 273 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 CD8AP01732 235 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 VKORC1Q9BQB6 163 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 LRRC61Q9BV99 259 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 VENTXO95231 258 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 SOX8P57073 446 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 SPINK2P20155 84 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
UBE3A-228ENST00000638155 HBDP02042 147 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 SEC11AP67812 179 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 GCSAMQ8N6F7 178 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 CD69Q07108 199 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 WFDC5Q8TCV5 224 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF488Q96MN9 340 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 TRAV24A0A0B4J272 114 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 DPM2O94777 84 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 HOXD4P09016 255 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 RSPO2Q6UXX9 243 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 POC1AQ8NBT0 407 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF658BQ4V348 819 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 RIPPLY2Q5TAB7 128 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 FAM90A26D6RGX4 464 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 OGG1O15527 345 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 PNLIPP16233 465 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 HIKESHIQ53FT3 197 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 MARS2Q96GW9 593 aaKnown RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 ITGB1BP1O14713 200 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 FOXA3P55318 350 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 SPINT1O43278 529 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 REG1AP05451 166 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 TSPAN7P41732 249 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF146Q15072 292 aa11.32□□□□□ -0.6
UBE3A-228ENST00000638155 MORN3Q6PF18 240 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 INO80CQ6PI98 192 aaPredicted RBP11.32□□□□□ -0.6
UBE3A-228ENST00000638155 C1QL1O75973 258 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 CXCL2P19875 107 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 R4GN57 208 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 A0A0U1RQV5 110 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 ODAMA1E959 279 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 TBR1Q16650 682 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
UBE3A-228ENST00000638155 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 NABP2Q9BQ15 211 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
UBE3A-228ENST00000638155 RTN4RL2Q86UN3 420 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 OR11H4Q8NGC9 324 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 RREB1Q92766 1687 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
UBE3A-228ENST00000638155 DANCRP0C864 163 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 ESDP10768 282 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 RND3P61587 244 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
UBE3A-228ENST00000638155 PKDREJQ9NTG1 2253 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 LIPT2A6NK58 231 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 C9orf153Q5TBE3 101 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 OR10W1Q8NGF6 305 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
UBE3A-228ENST00000638155 PRDM13Q9H4Q3 707 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 TMEM229AB2RXF0 380 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 CRYBG1Q9Y4K1 1723 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 KLF4O43474 513 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 SERGEFQ9UGK8 458 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
UBE3A-228ENST00000638155 C16orf97H3BN30 126 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 NMBP08949 121 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
UBE3A-228ENST00000638155 FUT5Q11128 374 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
UBE3A-228ENST00000638155 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
UBE3A-228ENST00000638155 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms