RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 PEA15Q15121 130 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 DIRC2Q96SL1 478 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 RPS10P5Q9NQ39 176 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 CACNA1BQ00975 2339 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 CENPEQ02224 2701 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 VSTM5A8MXK1 200 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 LOXP28300 417 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-214ENST00000637709 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-214ENST00000637709 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 SLC25A48Q6ZT89 311 aaKnown RBP12.53□□□□□ -0.4
SCN8A-214ENST00000637709 IQCF2Q8IXL9 164 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 LAMP3Q9UQV4 416 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 HFEQ30201 348 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 LRRC10Q5BKY1 277 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
SCN8A-214ENST00000637709 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
SCN8A-214ENST00000637709 OR13D1Q8NGV5 346 aa12.52□□□□□ -0.4
SCN8A-214ENST00000637709 GATAD1Q8WUU5 269 aa12.52□□□□□ -0.4
SCN8A-214ENST00000637709 TCF19Q9Y242 345 aa12.52□□□□□ -0.4
SCN8A-214ENST00000637709 PPIHO43447 177 aaKnown RBP12.52□□□□□ -0.41
SCN8A-214ENST00000637709 TLE4Q04727 773 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 ICAM4Q14773 271 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 ZNF787Q6DD87 383 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 MOB3BQ86TA1 216 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 CLCC1Q96S66 551 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 SEBOXQ9HB31 216 aaPredicted RBP12.52□□□□□ -0.41
SCN8A-214ENST00000637709 SLC35D1Q9NTN3 355 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
SCN8A-214ENST00000637709 B9A039 149 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 SOX15O60248 233 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 ARG1P05089 322 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 CLDND2Q8NHS1 167 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 RITA1Q96K30 269 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 PBDC1Q9BVG4 233 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 SLC35B3Q9H1N7 401 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 MYO18BQ8IUG5 2567 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 IFNA4P05014 189 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 TCTEX1D1Q8N7M0 179 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 CORO2AQ92828 525 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 NPCDR1Q9BY65 106 aa12.51□□□□□ -0.41
SCN8A-214ENST00000637709 A0A1W2PPR1 153 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 TNFRSF13BO14836 293 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-214ENST00000637709 SOD3P08294 240 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 OR8U8P0C7N1 319 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 APELAP0DMC3 54 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 ZNF672Q499Z4 452 aaPredicted RBP12.5□□□□□ -0.41
SCN8A-214ENST00000637709 HEPN1Q6WQI6 88 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 TMEM147Q9BVK8 224 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 E7EUB6 86 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 SCAF4O95104 1147 aaKnown RBP12.5□□□□□ -0.41
SCN8A-214ENST00000637709 THBS3P49746 956 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 SPCS3P61009 180 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 SOHLH1Q5JUK2 328 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
SCN8A-214ENST00000637709 PATZ1Q9HBE1 687 aaKnown RBP12.5□□□□□ -0.41
SCN8A-214ENST00000637709 MAP1LC3B2A6NCE7 125 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 C15orf61A6NNL5 157 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 SAA1P0DJI8 122 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-214ENST00000637709 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-214ENST00000637709 MLANAQ16655 118 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 SSMEM1Q8WWF3 244 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 CIB3Q96Q77 187 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-214ENST00000637709 MAP1LC3BQ9GZQ8 125 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 KIAA1456Q9P272 454 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 KPTNQ9Y664 436 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 C7orf77A4D0Y5 90 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 NDUFS7O75251 213 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 HIPK2Q9H2X6 1198 aa12.49□□□□□ -0.41
SCN8A-214ENST00000637709 USP9XQ93008 2570 aaPredicted RBP12.49□□□□□ -0.41
SCN8A-214ENST00000637709 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN8A-214ENST00000637709 COX7A1P24310 79 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 CD1BP29016 333 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 RAB11AP62491 216 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 PINX1Q96BK5 328 aaKnown RBP12.48□□□□□ -0.41
SCN8A-214ENST00000637709 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 ZNF727A8MUV8 499 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 SRP19P09132 144 aaKnown RBP12.48□□□□□ -0.41
SCN8A-214ENST00000637709 EFNB3Q15768 340 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
SCN8A-214ENST00000637709 C11orf42Q8N5U0 333 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 COMMD1Q8N668 190 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 OR10G4Q8NGN3 311 aa12.48□□□□□ -0.41
SCN8A-214ENST00000637709 OR10G9Q8NGN4 311 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms