RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 GFOD1Q9NXC2 390 aa13.27□□□□□ -0.28
CHRNA7-221ENST00000636898 IGHV3OR15-7A0A075B7D8 119 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 GATCO43716 136 aaKnown RBP13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 CRYAAP02489 173 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 GATA4P43694 442 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 ZNF83P51522 516 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 LCN2P80188 198 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 LINC01551Q86U37 167 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 MOGAT3Q86VF5 341 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 DEFB124Q8NES8 71 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 BTF3L4Q96K17 158 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 MGST2Q99735 147 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 PCGF1Q9BSM1 259 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 GGTLC1Q9BX51 225 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 TCF19Q9Y242 345 aa13.27□□□□□ -0.29
CHRNA7-221ENST00000636898 C15orf61A6NNL5 157 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 GNB1P62873 340 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 CDPF1Q6NVV7 123 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 CISD2Q8N5K1 135 aaKnown RBP13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 FAM222BQ8WU58 562 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 TMEM170AQ8WVE7 144 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 IMMP2LQ96T52 175 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 MS4A5Q9H3V2 200 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
CHRNA7-221ENST00000636898 IGLV3-9A0A075B6K5 115 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 C17orf58Q2M2W7 97 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 DEFB109BQ30KR1 87 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 TRAV3A0A0B4J244 114 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 SPAARA0A1B0GVQ0 90 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 M0R1B8 84 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 CXorf1O96002 111 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 ATP5G3P48201 142 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 THBS3P49746 956 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 PDLIM4P50479 330 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 CST9LP1Q5W188 147 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 ZADH2Q8N4Q0 377 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 TMEM14BQ9NUH8 114 aa13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 FOXA2Q9Y261 457 aaPredicted RBP13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 TET2Q6N021 2002 aaPredicted RBP13.25□□□□□ -0.29
CHRNA7-221ENST00000636898 SLC31A2O15432 143 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 ZNF474Q6S9Z5 364 aaPredicted RBP13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 SDSLQ96GA7 329 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 ADTRPQ96IZ2 230 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 CHODLQ9H9P2 273 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 PATZ1Q9HBE1 687 aaKnown RBP13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 DSCAML1Q8TD84 2053 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 DVL1O14640 695 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 NDUFB4O95168 129 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 ARL14EPLP0DKL9 152 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 UBE2G2P60604 165 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 POU2AF1Q16633 256 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 CT45A1Q5HYN5 189 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 IGFL3Q6UXB1 125 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 CT45A3Q8NHU0 189 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 ITLN1Q8WWA0 313 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 RHOVQ96L33 236 aa13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 DSPP15924 2871 aaKnown RBP13.24□□□□□ -0.29
CHRNA7-221ENST00000636898 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 XKRY2A2RUG3 117 aa13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 FNDC10F2Z333 226 aa13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 SPRY3O43610 288 aa13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 MIC13Q5XKP0 118 aa13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 C1orf229Q6ZS94 237 aaPredicted RBP13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 ZMAT5Q9UDW3 170 aaKnown RBP13.23□□□□□ -0.29
CHRNA7-221ENST00000636898 TRGV10A0A0A0MS01 117 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 IGHV3-7P01780 117 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 NPY1RP25929 384 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 FOXL1Q12952 345 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 JOSD1Q15040 202 aaPredicted RBP13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 TMEM30BQ3MIR4 351 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 OR4A47Q6IF82 309 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 SLC24A4Q8NFF2 622 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 TMEM204Q9BSN7 226 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 RNF7Q9UBF6 113 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 AMBPP02760 352 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 RD3LP0DJH9 198 aa13.22□□□□□ -0.29
CHRNA7-221ENST00000636898 NUBP1P53384 320 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms