RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, human

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN2A-213	ENST00000636769	ZNF48	Q96MX3	618 aa	Predicted RBP	5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	FOXC2	Q99958	501 aa		5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	DLL3	Q9NYJ7	618 aa		5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	KBTBD11-OT1	A0A1B0GTJ5	212 aa		5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	CX3CL1	P78423	397 aa		5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	EAF1	Q96JC9	268 aa	Predicted RBP	5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769	HILPDA	Q9Y5L2	63 aa		5.21	□□□□□ -1.57
SCN2A-213	ENST00000636769		C9JCJ5	164 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	RHOG	P84095	191 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	LHX9	Q9NQ69	397 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	NUP205	Q92621	2012 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769		H7C1H1	209 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	EIF4EBP2	Q13542	120 aa	Predicted RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	SSPN	Q14714	243 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	ZNF441	Q8N8Z8	693 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	GEMIN7	Q9H840	131 aa	Known RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	BEX4	Q9NWD9	120 aa	Predicted RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	LHFPL6	Q9Y693	200 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	IGHV5-51	A0A0C4DH38	117 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769		H0YIZ8	118 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	ID3	Q02535	119 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	KHDC1L	Q5JSQ8	128 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	C1orf185	Q5T7R7	199 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	UNQ5815/PRO19632	Q6UWF5	114 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	CYTL1	Q9NRR1	136 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	CENPVL1	A0A0U1RR11	272 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	CDX4	O14627	284 aa	Predicted RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	ITGBL1	O95965	494 aa	Predicted RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	OR9G9	P0C7N8	305 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	LIF	P15018	202 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	GFI1B	Q5VTD9	330 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	ASPHD2	Q6ICH7	369 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	FAM71F2	Q6NXP2	309 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	SCGB3A1	Q96QR1	104 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	SCO2	A0A1W2PP80	73 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769		H3BRM9	83 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	CCL2	P13500	99 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	IGFBP3	P17936	291 aa	Predicted RBP	5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	VEGFB	P49765	207 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	MEIG1	Q5JSS6	88 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	FBXW9	Q5XUX1	488 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	MRAP2	Q96G30	205 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	MOB4	Q9Y3A3	225 aa		5.21	□□□□□ -1.58
SCN2A-213	ENST00000636769	MYH14	Q7Z406	1995 aa	Known RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	FAM181B	A6NEQ2	426 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	IFNL4	K9M1U5	179 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	LYZL6	O75951	148 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	FCGR2B	P31994	310 aa	Predicted RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PSG4	Q00888	419 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	DRAM1	Q8N682	238 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	GDF15	Q99988	308 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PLSCR4	Q9NRQ2	329 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PPIAL4E	A0A075B759	164 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	IGKV1D-16	P01601	117 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PPIAL4F	P0DN26	164 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	KRTCAP3	Q53RY4	240 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	CST9L	Q9H4G1	147 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SIT1	Q9Y3P8	196 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PPIAL4A	Q9Y536	164 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SCN9A	Q15858	1988 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	DDX60L	Q5H9U9	1706 aa	Known RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	KIF13B	Q9NQT8	1826 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	HIGD1C	A8MV81	97 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SS18L1	O75177	396 aa	Predicted RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	NBEAP1	P0C6P0	100 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	COX7A1	P24310	79 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	MFAP4	P55083	255 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	S100A7L2	Q5SY68	101 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SLC25A28	Q96A46	364 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	LOXL4	Q96JB6	756 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SEMA5B	Q9P283	1151 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	FER1L6	Q2WGJ9	1857 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769		K7EQS6	105 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	EREG	O14944	169 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	ATP5G3	P48201	142 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	TMEM170B	Q5T4T1	132 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	GOLT1A	Q6ZVE7	132 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	ZNF721	Q8TF20	911 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	TSKU	Q8WUA8	353 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	METTL26	Q96S19	204 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	WNT9B	O14905	357 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	TMPRSS2	O15393	492 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	SNAI2	O43623	268 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	ZNF83	P51522	516 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	PCSK4	Q6UW60	755 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	C9orf40	Q8IXQ3	194 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	DLX4	Q92988	240 aa	Predicted RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	IFI27L2	Q9H2X8	130 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	FAM90A9P	A6NNJ1	464 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	GPX1	P07203	203 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	EGR1	P18146	543 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	TIMP3	P35625	211 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	ATXN8	Q156A1	80 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	GCSAML	Q5JQS6	135 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	APOBEC4	Q8WW27	367 aa	Known RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	FAM60A	Q9NP50	221 aa		5.2	□□□□□ -1.58
SCN2A-213	ENST00000636769	KLF2	Q9Y5W3	355 aa	Predicted RBP	5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms