RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 HOXB13Q92826 284 aaPredicted RBP5.17□□□□□ -1.58
CHD2-221ENST00000635856 C1orf43Q9BWL3 253 aa5.17□□□□□ -1.58
CHD2-221ENST00000635856 B9D1Q9UPM9 204 aa5.17□□□□□ -1.58
CHD2-221ENST00000635856 NYNRINQ9P2P1 1898 aaKnown RBP5.17□□□□□ -1.58
CHD2-221ENST00000635856 IGLV3-10A0A075B6K4 115 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 FCGR2BP31994 310 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 LINC00310P59036 64 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 UNC119Q13432 240 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 ZNF77Q15935 545 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 DMRTC1Q5HYR2 192 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 FAM159AQ6UWV7 190 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 ZNF611Q8N823 705 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 ATP6V0E2Q8NHE4 81 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 NHP2Q9NX24 153 aaKnown RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 POLDIP2Q9Y2S7 368 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 KLF12Q9Y4X4 402 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 H3BMG7 143 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 THBDP07204 575 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 PTGDSP41222 190 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 CLDN17P56750 224 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 POLR2LP62875 67 aaKnown RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 DLX2Q07687 328 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 GUSBP1Q15486 140 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 MFSD12Q6NUT3 480 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 H1FNTQ75WM6 255 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 LRRC25Q8N386 305 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 OR10J6PQ8NGY7 276 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 PLEKHA3Q9HB20 300 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 F11RQ9Y624 299 aaKnown RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 A0A087WX48 190 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 A0A0B4J2E0 115 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 A0A1B0GX12 115 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 IGFBP3P17936 291 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 HOXD9P28356 352 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 PSG4Q00888 419 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 MRPL23Q16540 153 aaKnown RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 Q6AWC8 147 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 DUX4L9Q6RFH8 374 aaPredicted RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 PPP1R27Q86WC6 154 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 GATSQ8NAP1 163 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 TMEM178AQ8NBL3 297 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 CHCHD1Q96BP2 118 aaKnown RBP5.16□□□□□ -1.58
CHD2-221ENST00000635856 RNF125Q96EQ8 232 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 PRRG4Q9BZD6 226 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 PDFQ9HBH1 243 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 GCM1Q9NP62 436 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 TAC3Q9UHF0 121 aa5.16□□□□□ -1.58
CHD2-221ENST00000635856 TMEM14DPA8MWL7 114 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 C9JAW5 83 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 M0QZQ0 153 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 MFAP2P55001 183 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 RPL8P62917 257 aaKnown RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 GNG5P63218 68 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 CX3CL1P78423 397 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 ZNF141Q15928 474 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 LINC01590Q5TEZ4 76 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 LRRC75A-AS1Q8N1F1 130 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 OCC1Q8TAD7 63 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 SPACA5Q96QH8 159 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 HSD17B10Q99714 261 aaKnown RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 HIGD1AQ9Y241 93 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 WNT6Q9Y6F9 365 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 SMAD7O15105 426 aaKnown RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 SYNGR2O43760 224 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 SRSF10O75494 262 aaKnown RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 SLC25A5P05141 298 aaKnown RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 ATXN8OSP0DMR3 200 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 CAMPP49913 170 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 MFAP5Q13361 173 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 BCL6BQ8N143 479 aaPredicted RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 OR51H1Q8NH63 302 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 ZNF689Q96CS4 500 aaPredicted RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 SLC25A33Q9BSK2 321 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 OR2H1Q9GZK4 316 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 TMEM222Q9H0R3 208 aa5.15□□□□□ -1.58
CHD2-221ENST00000635856 COL11A1P12107 1806 aaPredicted RBP5.15□□□□□ -1.58
CHD2-221ENST00000635856 TRAV24A0A0B4J272 114 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 H3BVH4 76 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 NAPSAO96009 420 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
CHD2-221ENST00000635856 NTF4P34130 210 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 EIF3IQ13347 325 aaKnown RBP5.15□□□□□ -1.59
CHD2-221ENST00000635856 ZNF726P1Q15940 193 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 PSMG4Q5JS54 123 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 OR52N5Q8NH56 324 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 C19orf25Q9UFG5 118 aaPredicted RBP5.15□□□□□ -1.59
CHD2-221ENST00000635856 LAMA3Q16787 3333 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 TRAV8-2A0A0B4J237 113 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 PRR32B1ATL7 298 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 CHEK1O14757 476 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 SP1P08047 785 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 ZNF688P0C7X2 276 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 XGP55808 180 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 SEC61GP60059 68 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 GNB1P62873 340 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 RNPS1Q15287 305 aaKnown RBP5.15□□□□□ -1.59
CHD2-221ENST00000635856 SLC48A1Q6P1K1 146 aa5.15□□□□□ -1.59
CHD2-221ENST00000635856 SLC23A3Q6PIS1 610 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms