RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SLC25A34Q6PIV7 304 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 GOLT1AQ6ZVE7 132 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ZIC4Q8N9L1 334 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ARPC1AQ92747 370 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SPSB4Q96A44 273 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF488Q96MN9 340 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TMEFF2Q9UIK5 374 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ASB1Q9Y576 335 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF831Q5JPB2 1677 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 POLEQ07864 2286 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IGLV3-16A0A075B6K0 115 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 GPX4P36969 197 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TPRX1Q8N7U7 411 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 SCARF2Q96GP6 870 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TBL2Q9Y4P3 447 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 NHSQ6T4R5 1651 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IGHV3-66A0A0C4DH42 116 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ASPDHA6ND91 283 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 TM4SF5O14894 197 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 DSCR9P59020 149 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 HSPE1P61604 102 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 LINC00305Q7Z4B0 112 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 KCNS1Q96KK3 526 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 RHOVQ96L33 236 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 MRPL18Q9H0U6 180 aaKnown RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 C1QAP02745 245 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 BCL2P10415 239 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IFI27P40305 119 aaPredicted RBP4.77□□□□□ -1.65
SCN1A-209ENST00000635750 UBE2V2Q15819 145 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF414Q96IQ9 312 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 JPT2Q9H910 190 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 UQCR10Q9UDW1 63 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IGKV1D-33P01593 117 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 IGKV1-33P01594 117 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 ERGP11308 486 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 PSG4Q00888 419 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 NCMAPQ5T1S8 102 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 C1QTNF12Q5T7M4 302 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 PRR13Q9NZ81 148 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 DPM3Q9P2X0 92 aa4.77□□□□□ -1.65
SCN1A-209ENST00000635750 LINC00587B1AMM8 73 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 RPL34P49207 117 aaKnown RBP4.76□□□□□ -1.65
SCN1A-209ENST00000635750 HBBP68871 147 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 OR10J3Q5JRS4 329 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 SLC25A38Q96DW6 304 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 WDFY2Q96P53 400 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 FBXL7Q9UJT9 491 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 A0A087WX48 190 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 FAM90A26D6RGX4 464 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 IGHV3-23P01764 117 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 BGLAPP02818 100 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ZP4Q12836 540 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 RARRES2Q99969 163 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PKIBQ9C010 78 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PLSCR2Q9NRY7 297 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 KIAA2026Q5HYC2 2103 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ABCA1O95477 2261 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 HOGA1Q86XE5 327 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 VKORC1L1Q8N0U8 176 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 LINC01465Q8N7H1 131 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PEX7O00628 323 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 UPK3AO75631 287 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 CD7P09564 240 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 CEACAM1P13688 526 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ATP6V0CP27449 155 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PAX2Q02962 417 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 KLF14Q8TD94 323 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-209ENST00000635750 RNASEH2CQ8TDP1 164 aaKnown RBP4.76□□□□□ -1.65
SCN1A-209ENST00000635750 LOC285556D6RIA3 1793 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 SCN4AP35499 1836 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PGFP49763 221 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 TIMM23BQ5SRD1 257 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 CLEC19AQ6UXS0 136 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 OR10S1Q8NGN2 331 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF721Q8TF20 911 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 FLRT3Q9NZU0 649 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 C5orf67F2Z3F1 127 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 ZIC1Q15915 447 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 FOXB2Q5VYV0 432 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 PARLQ9H300 379 aa4.76□□□□□ -1.65
SCN1A-209ENST00000635750 A0A1W2PPC1 479 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 C1orf53Q5VUE5 145 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 C9orf40Q8IXQ3 194 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 MYEOVQ96EZ4 313 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 TRAV8-6A0A0B4J262 113 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 LHBP01229 141 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 KLK2P20151 261 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 GPR183P32249 361 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 PEAR1Q5VY43 1037 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-209ENST00000635750 LILRA6Q6PI73 481 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF385AQ96PM9 386 aaKnown RBP4.75□□□□□ -1.65
SCN1A-209ENST00000635750 ZDBF2Q9HCK1 2354 aa4.75□□□□□ -1.65
SCN1A-209ENST00000635750 FAM90A10PA6NDY2 464 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms