RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 H7C2Y5 167 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 K7EPK0 472 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 FBXO24O75426 580 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
LINC00339-208ENST00000634934 CEACAM3P40198 252 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 REG1BP48304 166 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 TMEM187Q14656 261 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 IAH1Q2TAA2 248 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-208ENST00000634934 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF645Q8N7E2 425 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 FAM216AQ8WUB2 273 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 C22orf15Q8WYQ4 148 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 SMDT1Q9H4I9 107 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 TMEM160Q9NX00 188 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-208ENST00000634934 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
LINC00339-208ENST00000634934 A0A0U1RQK1 487 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 A0A1B0GW64 132 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF705EA8MWA4 302 aaPredicted RBP11.68□□□□□ -0.54
LINC00339-208ENST00000634934 FOLR2P14207 255 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 P2RY1P47900 373 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 BPIFB3P59826 476 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 RND3P61587 244 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 SSX2Q16385 188 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 TPTE2P1Q5T6R2 138 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 DRAM1Q8N682 238 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 CCDC71LQ8N9Z2 235 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 DMBX1Q8NFW5 382 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 TMED3Q9Y3Q3 217 aa11.68□□□□□ -0.54
LINC00339-208ENST00000634934 F8W036 122 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 LY6LH3BQJ8 138 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 M0R1X1 148 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 PI3P19957 117 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 GNRHRP30968 328 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 PHLDA2Q53GA4 152 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 GGNBP1Q5YKI7 109 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 LIAT1Q6ZQX7 453 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF818PQ6ZRF7 136 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 TGIF2LXQ8IUE1 241 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 BCL6BQ8N143 479 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-208ENST00000634934 ST6GALNAC6Q969X2 333 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 MALSU1Q96EH3 234 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 C5orf30Q96GV9 206 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 GINS3Q9BRX5 216 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 RSRP1Q9BUV0 290 aa11.67□□□□□ -0.54
LINC00339-208ENST00000634934 FAM212BQ9NTI7 297 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-208ENST00000634934 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
LINC00339-208ENST00000634934 GPR31O00270 319 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 TNFSF12O43508 249 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 GPR137BO60478 399 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 CDS2O95674 445 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 IGLV2-14P01704 120 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF137PP52743 207 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 ABCA11PQ4W5N1 156 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 LGI3Q8N145 548 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 DYNAPQ8N1N2 210 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-208ENST00000634934 AJUBAQ96IF1 538 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 ZNF251Q9BRH9 671 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 MRPL20Q9BYC9 149 aaKnown RBP11.66□□□□□ -0.54
LINC00339-208ENST00000634934 TUBA4BQ9H853 241 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 MXRA5Q9NR99 2828 aa11.66□□□□□ -0.54
LINC00339-208ENST00000634934 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 PROP1O75360 226 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 HOXB5P09067 269 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
LINC00339-208ENST00000634934 MOB3BQ86TA1 216 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 CMTM1Q8IZ96 169 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 CDC42EP3Q9UKI2 254 aa11.65□□□□□ -0.54
LINC00339-208ENST00000634934 OOSP1A8MZH6 123 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 FBP1P09467 338 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 SPP1P10451 314 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 S100GP29377 79 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 PIGPP57054 158 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 LINC00205P59089 165 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 ZNF816Q0VGE8 651 aaPredicted RBP11.65□□□□□ -0.55
LINC00339-208ENST00000634934 MSMO1Q15800 293 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 CCDC144NLQ6NUI1 221 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 FAM71F2Q6NXP2 309 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 LFNGQ8NES3 379 aa11.65□□□□□ -0.55
LINC00339-208ENST00000634934 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 MDFIC2A0A1B0GVS7 189 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 TXNL1O43396 289 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 MED6O75586 246 aa11.64□□□□□ -0.55
LINC00339-208ENST00000634934 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms