RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	PAX5	Q02548	391 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RIG	Q13278	110 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	KIAA0141	Q14154	515 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	KISS1	Q15726	138 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	PIGY	Q3MUY2	71 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF691	Q5VV52	312 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	LIPK	Q5VXJ0	399 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	C12orf73	Q69YU5	71 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	FAHD1	Q6P587	224 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	LINC00311	Q8N616	119 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OR51A4	Q8NGJ6	313 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OR10K1	Q8NGX5	313 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OR6F1	Q8NGZ6	308 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	NEK7	Q8TDX7	302 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TNFAIP8L1	Q8WVP5	186 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ARL11	Q969Q4	196 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	PINX1	Q96BK5	328 aa	Known RBP	4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RBMXL1	Q96E39	390 aa	Known RBP	4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	CPNE2	Q96FN4	548 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF486	Q96H40	463 aa	Predicted RBP	4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	MBOAT4	Q96T53	435 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TOLLIP	Q9H0E2	274 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	VCX3B	Q9H321	246 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	MED4	Q9NPJ6	270 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GNG12	Q9UBI6	72 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	KLK11	Q9UBX7	282 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ARL2BP	Q9Y2Y0	163 aa		4.9	□□□□□ -1.63
SMARCA2-223	ENST00000634435	IGHV7-81	A0A0B4J1V7	117 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SERTM2	A0A1B0GWG4	89 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RBMY1B	A6NDE4	496 aa	Known RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RBMY1E	A6NEQ0	496 aa	Known RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435		H0Y8G0	127 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SLC31A2	O15432	143 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SULT1B1	O43704	296 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	IGLV2-11	P01706	119 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	IGHV3-11	P01762	117 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	HLA-DRB1	P01911	266 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ISG15	P05161	165 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	HTR1A	P08908	422 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RBMY1D	P0C7P1	496 aa	Known RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GZMH	P20718	246 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	BLVRB	P30043	206 aa	Predicted RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	DAP	P51397	102 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ACTB	P60709	375 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF85	Q03923	595 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	KLF5	Q13887	457 aa	Predicted RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	P2RY14	Q15391	338 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RSU1	Q15404	277 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	HAGH	Q16775	308 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ELP2	Q6IA86	826 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SLC25A48	Q6ZT89	311 aa	Known RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	C8orf31	Q8N9H6	132 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SUMF2	Q8NBJ7	301 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	CASTOR1	Q8WTX7	329 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	FLYWCH2	Q96CP2	140 aa	Known RBP	4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GPER1	Q99527	375 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF251	Q9BRH9	671 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TUBA4B	Q9H853	241 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RETN	Q9HD89	108 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF446	Q9NWS9	450 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TNC	P24821	2201 aa		4.89	□□□□□ -1.63
SMARCA2-223	ENST00000634435	DAPL1	A0PJW8	107 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	MFSD2B	A6NFX1	497 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	C12orf77	C9JDV5	145 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	C15orf65	H3BRN8	121 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	AIP	O00170	330 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	NBR2	O15453	112 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TNFSF12	O43508	249 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	IGLV1-51	P01701	117 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	STAG3L3	P0CL85	134 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GNB3	P16520	340 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF137P	P52743	207 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	RBM11	P57052	281 aa	Known RBP	4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	MRPS15	P82914	257 aa	Known RBP	4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	NDP	Q00604	133 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	FLOT2	Q14254	428 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	C5orf64	Q2M2E5	130 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435		Q3ZCU0	254 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ATAD3C	Q5T2N8	411 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GTSCR1	Q86UQ5	136 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	STX19	Q8N4C7	294 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	PXT1	Q8NFP0	134 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OR5D14	Q8NGL3	314 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TSEN15	Q8WW01	171 aa	Known RBP	4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OVOL2	Q9BRP0	275 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	TMED9	Q9BVK6	235 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	MRPL20	Q9BYC9	149 aa	Known RBP	4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ANKRD60	Q9BZ19	345 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	CST11	Q9H112	138 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ZNF581	Q9P0T4	197 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ENOPH1	Q9UHY7	261 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ERGIC3	Q9Y282	383 aa		4.88	□□□□□ -1.63
SMARCA2-223	ENST00000634435	LYST	Q99698	3801 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	CSMD3	Q7Z407	3707 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	OR4C45	A6NMZ5	311 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	HSBP1L1	C9JCN9	74 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	GABRP	O00591	440 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	ORC5	O43913	435 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	SOX15	O60248	233 aa		4.87	□□□□□ -1.63
SMARCA2-223	ENST00000634435	HSPB1	P04792	205 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms