RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 A0A1W2PPK0 400 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1W2PPV9 198 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 IGLC7A0M8Q6 106 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM181BA6NEQ2 426 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 H7C1H1 209 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A6P12236 298 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 LPAR6P43657 344 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CFHR1Q03591 330 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ELOBQ15370 118 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 MUC21Q5SSG8 566 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TEX36Q5VZQ5 186 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM25Q86YD3 366 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF433Q8N7K0 673 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF740Q8NDX6 193 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 OR4C3Q8NH37 302 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ARPC1AQ92747 370 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TSACCQ96A04 125 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A38Q96DW6 304 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 YPEL4Q96NS1 127 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 SPACA5Q96QH8 159 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 RPP25Q9BUL9 199 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PRTFDC1Q9NRG1 225 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 MYO7AQ13402 2215 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 IGKV6D-21A0A0A0MT36 114 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1W2PR77 199 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CDC14CA4D256 554 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 BMPR1BO00238 502 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF253O75346 499 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CT62P0C5K7 136 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 WASP42768 502 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PPICP45877 212 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 RPL11P62913 178 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 HLA-DRB3P79483 266 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CD164Q04900 197 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 GGTLC2Q14390 218 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CSRP2Q16527 193 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF750Q32MQ0 723 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TEX43Q6ZNM6 134 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 SUMF1Q8NBK3 374 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 AQP10Q96PS8 301 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 NAA60Q9H7X0 242 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 PNRC2Q9NPJ4 139 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 CYTL1Q9NRR1 136 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM30AQ9NV96 361 aa3.3□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM24AA6NFZ4 105 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 J3QRE1 110 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CXCL1P09341 107 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 H2BFMP0C1H6 154 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 SEC11BP0C7V7 166 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 IGLC6P0CF74 106 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 GLIPR1P48060 266 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 XGP55808 180 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 PNRC1Q12796 327 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 KLRD1Q13241 179 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 MLF2Q15773 248 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CLEC12BQ2HXU8 276 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 DEFB125Q8N687 156 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 OR5H2Q8NGV7 314 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 APOBEC4Q8WW27 367 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 PRDM14Q9GZV8 571 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 NUP205Q92621 2012 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 ZZEF1O43149 2961 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 GOLGA4Q13439 2230 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TRBV9A0A0B4J1U6 114 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CDC42EP2O14613 210 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TAX1BP3O14907 124 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 SPRY2O43597 315 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 GPANK1O95872 356 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 NGFP01138 241 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 AMY1AP04745 511 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CRISP2P16562 243 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 FOXE3Q13461 319 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 LINC00116Q8NCU8 138 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 OR4X2Q8NGF9 303 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 DDIT4LQ96D03 193 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 BORCS8Q96FH0 119 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 SPIN2AQ99865 258 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 SPIN2BQ9BPZ2 258 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 NRN1Q9NPD7 142 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CLCF1Q9UBD9 225 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 DOCK5Q9H7D0 1870 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 ALPK3Q96L96 1907 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 NSG1A0A0A6YYJ2 146 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 IGHV2-26A0A0B4J1V2 119 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TRAV8-6A0A0B4J262 113 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 IGKV6-21A0A0C4DH24 114 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 DPRXA6NFQ7 191 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 FRG2CA6NGY1 282 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 C9JQL5 133 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 H3BP45 60 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TRACP01848 142 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 CRYBB3P26998 211 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 VDAC2P45880 294 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 COA6Q5JTJ3 125 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 C9orf57Q5W0N0 161 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 PMS2CLQ68D20 193 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms