RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 CXCL2P19875 107 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 COX7A1P24310 79 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 S100A11P31949 105 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 LGALS4P56470 323 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 UBE2KP61086 200 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 INO80EQ8NBZ0 244 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 RNASE11Q8TAA1 199 aaKnown RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 MS4A7Q9GZW8 240 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 MEGF9Q9H1U4 602 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 TMEM140Q9NV12 185 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 OR5AC2Q9NZP5 309 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 PRNDQ9UKY0 176 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 FOXA2Q9Y261 457 aaPredicted RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 RCL1Q9Y2P8 373 aaKnown RBP9.48□□□□□ -0.89
LINC00963-220ENST00000625171 CSPG4Q6UVK1 2322 aa9.48□□□□□ -0.89
LINC00963-220ENST00000625171 FXYD6-FXYD2A0A087WZ82 144 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 L7N2F9 121 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 UPK2O00526 184 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 TAAR5O14804 337 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 SHOXO15266 292 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 ARPC5O15511 151 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 CHST1O43916 411 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 GPR137BO60478 399 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 TSC22D2O75157 780 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 SCAF4O95104 1147 aaKnown RBP9.47□□□□□ -0.89
LINC00963-220ENST00000625171 CRYGBP07316 175 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 NUP62P37198 522 aaPredicted RBP9.47□□□□□ -0.89
LINC00963-220ENST00000625171 PAX9P55771 341 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 SPCS3P61009 180 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 LRRC37A5PQ49AS3 106 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 OR4A47Q6IF82 309 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 NPBQ8NG41 125 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 OR5B3Q8NH48 314 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
LINC00963-220ENST00000625171 LYRM2Q9NU23 88 aaPredicted RBP9.47□□□□□ -0.89
LINC00963-220ENST00000625171 HIF1ANQ9NWT6 349 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 HSPB11Q9Y547 144 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 ATRQ13535 2644 aa9.47□□□□□ -0.89
LINC00963-220ENST00000625171 FN1P02751 2386 aaKnown RBP9.46□□□□□ -0.89
LINC00963-220ENST00000625171 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 H7C2Y5 167 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 NPFFO15130 113 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 KBTBD11O94819 623 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 VENTXO95231 258 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 IGHV1-69P01742 117 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 OR9G9P0C7N8 305 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 IGHV4-31P0DP07 118 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 HKR1P10072 659 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 MAS1LP35410 378 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 REG1BP48304 166 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 DLX1P56177 255 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 HSPE1P61604 102 aaKnown RBP9.46□□□□□ -0.9
LINC00963-220ENST00000625171 POLR2GP62487 172 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC00963-220ENST00000625171 KLRD1Q13241 179 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 AANATQ16613 207 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 TMUB2Q71RG4 321 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 OR4A16Q8NH70 328 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 SPATA3Q8NHX4 192 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 DCUN1D4Q92564 292 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 HARBI1Q96MB7 349 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 SLC25A31Q9H0C2 315 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 C7orf69Q9H7B7 122 aa9.46□□□□□ -0.9
LINC00963-220ENST00000625171 LSM5Q9Y4Y9 91 aaKnown RBP9.46□□□□□ -0.9
LINC00963-220ENST00000625171 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 WRBO00258 174 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 NDUFA3O95167 84 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
LINC00963-220ENST00000625171 BRS3P32247 399 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 S100A10P60903 97 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 RPS16P62249 146 aaKnown RBP9.45□□□□□ -0.9
LINC00963-220ENST00000625171 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
LINC00963-220ENST00000625171 BAXQ07812 192 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 OPCMLQ14982 345 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 VMA21Q3ZAQ7 101 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 LHFPL4Q7Z7J7 247 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 MOB3BQ86TA1 216 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 STPG2Q8N412 459 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 Q8N6K4 173 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 OR2T10Q8NGZ9 312 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 GRPEL2Q8TAA5 225 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 Q96MF0 132 aa9.45□□□□□ -0.9
LINC00963-220ENST00000625171 WNK2Q9Y3S1 2297 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00963-220ENST00000625171 RGS13O14921 159 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 TIMM23O14925 209 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 TMEM50AO95807 157 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 MOSP00540 346 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 FSHBP01225 129 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 SAA1P0DJI8 122 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms