RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NIT1Q86X76 327 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 OR2M7Q8NG81 312 aa12.71□□□□□ -0.37
PMS1-221ENST00000624204 SSBP3Q9BWW4 388 aaPredicted RBP12.71□□□□□ -0.37
PMS1-221ENST00000624204 LOC400499M0QZD8 3231 aa12.71□□□□□ -0.38
PMS1-221ENST00000624204 RPL30P62888 115 aaKnown RBP12.71□□□□□ -0.38
PMS1-221ENST00000624204 PMCHL1Q16048 86 aa12.71□□□□□ -0.38
PMS1-221ENST00000624204 OR4A47Q6IF82 309 aa12.71□□□□□ -0.38
PMS1-221ENST00000624204 WDR74Q6RFH5 385 aaPredicted RBP12.71□□□□□ -0.38
PMS1-221ENST00000624204 GNB1LQ9BYB4 327 aa12.71□□□□□ -0.38
PMS1-221ENST00000624204 CST9LQ9H4G1 147 aa12.71□□□□□ -0.38
PMS1-221ENST00000624204 TECRQ9NZ01 308 aaKnown RBP12.71□□□□□ -0.38
PMS1-221ENST00000624204 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.38
PMS1-221ENST00000624204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 RNF212BA8MTL3 300 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 LMO7DNF2Z398 122 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 NUDT10Q8NFP7 164 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 SGK494Q96LW2 274 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 HSBP1O75506 76 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 EAF1Q96JC9 268 aaPredicted RBP12.7□□□□□ -0.38
PMS1-221ENST00000624204 NAA38Q9BRA0 125 aaKnown RBP12.7□□□□□ -0.38
PMS1-221ENST00000624204 SFXN3Q9BWM7 321 aa12.7□□□□□ -0.38
PMS1-221ENST00000624204 SCRG1O75711 98 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
PMS1-221ENST00000624204 GABRA2P47869 451 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 PRR27Q6MZM9 219 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 GCNT2Q8N0V5 402 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 TSKUQ8WUA8 353 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 WASHC3Q9Y3C0 194 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 IGHV2-26A0A0B4J1V2 119 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 IGHV1-69-2A0A0G2JMI3 117 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 CXorf1O96002 111 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
PMS1-221ENST00000624204 OCIAD2Q56VL3 154 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 C1QTNF5Q9BXJ0 243 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 TRAV9-1A0A075B6T8 112 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 A0A1W2PN81 502 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.69□□□□□ -0.38
PMS1-221ENST00000624204 RAC2P15153 192 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 WDR73Q6P4I2 378 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 STPG3Q8N7X2 389 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 PMCHL2Q9BQD1 86 aa12.69□□□□□ -0.38
PMS1-221ENST00000624204 MMP23AO75900 390 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 LIFP15018 202 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 IGLL1P15814 213 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 CAMPP49913 170 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 GNG4P50150 75 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 DSCR4P56555 118 aaPredicted RBP12.68□□□□□ -0.38
PMS1-221ENST00000624204 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
PMS1-221ENST00000624204 PQLC2Q6ZP29 291 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 WDR83OSQ9Y284 106 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 TRAV30A0A087WSZ9 112 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 BMPR1BO00238 502 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 GRPP07492 148 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 RAC1P63000 192 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 V9GYV3 84 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 IGLC7A0M8Q6 106 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 MT-ND6P03923 174 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 CD24P25063 80 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 MORN2Q502X0 79 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 TMEM136Q6ZRR5 245 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
PMS1-221ENST00000624204 ZNF891A8MT65 544 aaPredicted RBP12.67□□□□□ -0.38
PMS1-221ENST00000624204 M0R2Z0 102 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 PPBPP02775 128 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 TMEM11P17152 192 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 CENPWQ5EE01 88 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 ZNF841Q6ZN19 808 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 BCL2L2Q92843 193 aaPredicted RBP12.67□□□□□ -0.38
PMS1-221ENST00000624204 ZPBPQ9BS86 351 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 OR2T8A6NH00 312 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 RAC3P60763 192 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 WIPI1Q5MNZ9 446 aaPredicted RBP12.67□□□□□ -0.38
PMS1-221ENST00000624204 DCAF12Q5T6F0 453 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 C19orf35Q6ZS72 473 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 Q8N7P7 452 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 KCNE4Q8WWG9 221 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 PRDM14Q9GZV8 571 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
PMS1-221ENST00000624204 HEYLQ9NQ87 328 aaPredicted RBP12.67□□□□□ -0.38
PMS1-221ENST00000624204 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 C15orf62A8K5M9 175 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 GOSR1O95249 250 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 GCHFRP30047 84 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CATR1Q13166 79 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 C17orf82Q86X59 251 aaPredicted RBP12.66□□□□□ -0.38
PMS1-221ENST00000624204 WFDC8Q8IUA0 241 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 RAB1CQ92928 201 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 CLEC1BQ9P126 229 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 NCOR1O75376 2440 aa12.66□□□□□ -0.38
PMS1-221ENST00000624204 FOXH1O75593 365 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms