RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 TTC9CQ8N5M4 171 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 OR5H2Q8NGV7 314 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 MOB3AQ96BX8 217 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 ELOVL1Q9BW60 279 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 BET1LQ9NYM9 111 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 SMIM31A0A1B0GVY4 71 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 TEX22C9J3V5 150 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 SULT1C2O00338 296 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
LINC00643-205ENST00000623219 HPRT1P00492 218 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 RFX2P48378 723 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 RORCP51449 518 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 TAS2R31P59538 309 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
LINC00643-205ENST00000623219 RHOGP84095 191 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF45Q02386 682 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 DHRS11Q6UWP2 260 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 OR51H1Q8NH63 302 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 CD300LFQ8TDQ1 290 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 GPX8Q8TED1 209 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF2Q9BSG1 426 aaPredicted RBP11.36□□□□□ -0.59
LINC00643-205ENST00000623219 FXYD6Q9H0Q3 95 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 SCPEP1Q9HB40 452 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 AKIP1Q9NQ31 210 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 ADAM30Q9UKF2 790 aa11.36□□□□□ -0.59
LINC00643-205ENST00000623219 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 HPGDSO60760 199 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 PMP2P02689 132 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 FGF2P09038 288 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF735P0CB33 412 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 NQO2P16083 231 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 GNRHRP30968 328 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 HRH1P35367 487 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 EXOSC2Q13868 293 aaKnown RBP11.35□□□□□ -0.59
LINC00643-205ENST00000623219 CTF1Q16619 201 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 VAX1Q5SQQ9 334 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 AADACL3Q5VUY0 350 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 OR4A47Q6IF82 309 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 C11orf87Q6NUJ2 197 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 AP3S1Q92572 193 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 MRPS26Q9BYN8 205 aaKnown RBP11.35□□□□□ -0.59
LINC00643-205ENST00000623219 PLEKHA2Q9HB19 425 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 COMMD9Q9P000 198 aa11.35□□□□□ -0.59
LINC00643-205ENST00000623219 DPPA5A6NC42 116 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 HMX3A6NHT5 357 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 TRBV12-3P01733 135 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 PRH1P02810 166 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 RLN1P04808 185 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 IL6RP08887 468 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-205ENST00000623219 GP9P14770 177 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 SPNP16150 400 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 HLA-GP17693 338 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 ELK1P19419 428 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 RCVRNP35243 200 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 KLF5Q13887 457 aaPredicted RBP11.34□□□□□ -0.59
LINC00643-205ENST00000623219 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 MZT2AQ6P582 158 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 SNX29P2Q8IUI4 249 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 FYTTD1Q96QD9 318 aaKnown RBP11.34□□□□□ -0.59
LINC00643-205ENST00000623219 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 NAA50Q9GZZ1 169 aaKnown RBP11.34□□□□□ -0.59
LINC00643-205ENST00000623219 HRASLSQ9HDD0 168 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 SLC2A9Q9NRM0 540 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
LINC00643-205ENST00000623219 A0A1B0GW64 132 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 E7EUB6 86 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 S1PR2O95136 353 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 DHFRP00374 187 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 NHLRC4P0CG21 123 aaPredicted RBP11.33□□□□□ -0.6
LINC00643-205ENST00000623219 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 OR6F1Q8NGZ6 308 aa11.33□□□□□ -0.6
LINC00643-205ENST00000623219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.32□□□□□ -0.6
LINC00643-205ENST00000623219 GPR31O00270 319 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 OR2J3O76001 311 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 CRYGCP07315 174 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 HLA-DMAP28067 261 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 ERVK-16P61578 105 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 TATDN3Q17R31 274 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 LYSMD2Q8IV50 215 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 TMEM140Q9NV12 185 aa11.32□□□□□ -0.6
LINC00643-205ENST00000623219 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
LINC00643-205ENST00000623219 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
LINC00643-205ENST00000623219 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
LINC00643-205ENST00000623219 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms