RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ARPC5O15511 151 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 LY6G6DO95868 133 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 MOSP00540 346 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 EXOSC2Q13868 293 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 IAH1Q2TAA2 248 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 THOC7Q6I9Y2 204 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 FAM219AQ8IW50 185 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 OR2T10Q8NGZ9 312 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 FAM90A9PA6NNJ1 464 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 FAM106CPP0CH98 169 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 FOSL1P15407 271 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 SRP14P37108 136 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 LGALS7P47929 136 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 C9orf139Q6ZV77 190 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 EAF1Q96JC9 268 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 C2orf50Q96LR7 162 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 SPIN2AQ99865 258 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 SPIN2BQ9BPZ2 258 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 NMES1Q9C002 83 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 GSKIPQ9P0R6 139 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 MDFIC2A0A1B0GVS7 189 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 RPS10-NUDT3A0A1W2PQS6 291 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 LINC00862A6NCI5 91 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 P0C879 139 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 SAA1P0DJI8 122 aaPredicted RBP14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 HNF1AP20823 631 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 POU2AF1Q16633 256 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 DEFB112Q30KQ8 113 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 OR4A47Q6IF82 309 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 PPP1R1CQ8WVI7 109 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 TSNAXQ99598 290 aaKnown RBP14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 RNF5Q99942 180 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 CACNG5Q9UF02 275 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 TNFSF18Q9UNG2 199 aa14.28□□□□□ -0.12
PTCHD3-202ENST00000622555 A0A1B0GU03 582 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 IGLV2-23P01705 113 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 TMEM11P17152 192 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 CNTFRP26992 372 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 DYNLT3P51808 116 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 CYCSP99999 105 aaKnown RBP14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 EBI3Q14213 229 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 SMCO1Q147U7 214 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 LRRC75BQ2VPJ9 315 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 VMA21Q3ZAQ7 101 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 FBLN7Q53RD9 439 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 CLLU1Q5K131 121 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 Q6ZRM9 215 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 THNSL2Q86YJ6 484 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 SSX3Q99909 188 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 MFFQ9GZY8 342 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 UBQLN2Q9UHD9 624 aa14.27□□□□□ -0.12
PTCHD3-202ENST00000622555 SLC25A17O43808 307 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 OR9G9P0C7N8 305 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 IL15RAQ13261 267 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 MMDQ15546 238 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 CLEC9AQ6UXN8 241 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 ZNF546Q86UE3 836 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 OR1S1Q8NH92 325 aa14.27□□□□□ -0.13
PTCHD3-202ENST00000622555 TNCP24821 2201 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 A0A0D9SG52 128 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 ANKRD34BA5PLL1 514 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 RBMXL2O75526 392 aaKnown RBP14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 SLC25A6P12236 298 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 UBE2KP61086 200 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 ZNF345Q14585 488 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 PSG5Q15238 335 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 PUSL1Q8N0Z8 303 aaKnown RBP14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 KCNRGQ8N5I3 272 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 VSTM2AQ8TAG5 236 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 ARL6Q9H0F7 186 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 TMEM160Q9NX00 188 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 NSG2Q9Y328 171 aa14.26□□□□□ -0.13
PTCHD3-202ENST00000622555 TRAV3A0A0B4J244 114 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 KBTBD11O94819 623 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 OR2F2O95006 317 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 F2RL1P55085 397 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 OR2F1Q13607 317 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 Q8N6K4 173 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 OR4A16Q8NH70 328 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 ZDHHC16Q969W1 377 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 BET1LQ9NYM9 111 aa14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 TET2Q6N021 2002 aaPredicted RBP14.25□□□□□ -0.13
PTCHD3-202ENST00000622555 H3BUX3 64 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 NBR2O15453 112 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 SPDEFO95238 335 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 SCGB1D2O95969 90 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 LYL1P12980 280 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 PSMB6P28072 239 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 OR2B8PP59922 312 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 AANATQ16613 207 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 PIFOQ8TCI5 191 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 COA4Q9NYJ1 87 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 KIAA1456Q9P272 454 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 METTL1Q9UBP6 276 aaKnown RBP14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 HIVEP2P31629 2446 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 HIVEP1P15822 2718 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 RNF222A6NCQ9 220 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms