RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ZNF609O15014 1411 aa2.24□□□□□ -2.05
CPNE3-213ENST00000622183 PSME4Q14997 1843 aa2.24□□□□□ -2.05
CPNE3-213ENST00000622183 PCF11O94913 1555 aaKnown RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 BICRAQ9NZM4 1560 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 PRDM15P57071 1507 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 MED14O60244 1454 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 SNAPC4Q5SXM2 1469 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 C9orf170A2RU37 121 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 M0R381 172 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 SLC17A3O00476 420 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 CXCR6O00574 342 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 MT-CO2P00403 227 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 IL3P08700 152 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 CPMP14384 443 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 DDTP30046 118 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 PSME3P61289 254 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 LSM6P62312 80 aaKnown RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 PPP1R1AQ13522 171 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 TAF1AQ15573 450 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 OGFRL1Q5TC84 451 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 C1orf174Q8IYL3 243 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 UBL4BQ8N7F7 174 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 OR4K15Q8NH41 348 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 RNASE11Q8TAA1 199 aaKnown RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 PIGXQ8TBF5 258 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 NEK7Q8TDX7 302 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 EEF1AKMT1Q8WVE0 214 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 YIPF3Q9GZM5 350 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 TUBA4BQ9H853 241 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 SNX12Q9UMY4 172 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 POLR1DQ9Y2S0 133 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 KIF1BO60333 1816 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 MYO5BQ9ULV0 1848 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 MYOM3Q5VTT5 1437 aa2.23□□□□□ -2.05
CPNE3-213ENST00000622183 EIF4G3O43432 1585 aaKnown RBP2.23□□□□□ -2.05
CPNE3-213ENST00000622183 NALCNQ8IZF0 1738 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 MAP3K1Q13233 1512 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 ZNF532Q9HCE3 1301 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 SCAF11Q99590 1463 aaKnown RBP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 TMEM131LA2VDJ0 1609 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 SMARCA4P51532 1647 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 ZCCHC11Q5TAX3 1644 aaKnown RBP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 J3QRE1 110 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 CHP2O43745 196 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 KRT75O95678 551 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 IFNA10P01566 189 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 IFNA4P05014 189 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 CALB1P05937 261 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 CRYBB3P26998 211 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 CA5AP35218 305 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 PHBP35232 272 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 PSPHP78330 225 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 FOXF1Q12946 379 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 C12orf57Q99622 126 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 KIFC1Q9BW19 673 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 MRPS26Q9BYN8 205 aaKnown RBP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 TLNRD1Q9H1K6 362 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 TXNL4BQ9NX01 149 aaKnown RBP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 BABAM2Q9NXR7 383 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 PSORS1C2Q9UIG4 136 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 DKKL1Q9UK85 242 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 ARL5AQ9Y689 179 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 ADAMTSL1Q8N6G6 1762 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 WRNQ14191 1432 aaPredicted RBP eCLIP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 INO80Q9ULG1 1556 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-213ENST00000622183 RTL1A6NKG5 1358 aa2.22□□□□□ -2.05
CPNE3-213ENST00000622183 CHD5Q8TDI0 1954 aa2.21□□□□□ -2.05
CPNE3-213ENST00000622183 VPS37CA5D8V6 355 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 C17orf51A8MQB3 221 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 K7EP13 123 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 M0R036 132 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 KPNA3O00505 521 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 KPNA4O00629 521 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 SYNMO15061 1565 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 PLCH2O75038 1416 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 IFNA5P01569 189 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 TCRBP04435 133 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 S100A8P05109 93 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 FAM228BP0C875 321 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 CCL3P10147 92 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 COX4I1P13073 169 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 KCNE1P15382 129 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 GZMHP20718 246 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 CRHBPP24387 322 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 BLVRBP30043 206 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 RPL12P30050 165 aaKnown RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 CD200P41217 278 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 RPL5P46777 297 aaKnown RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 IDH3GP51553 393 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 BTN3A2P78410 334 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 POU6F1Q14863 301 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 TMEM176BQ3YBM2 270 aaPredicted RBP2.21□□□□□ -2.06
CPNE3-213ENST00000622183 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CPNE3-213ENST00000622183 TMEM42Q69YG0 159 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms