RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 SLC7A6Q92536 515 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ADAT3Q96EY9 351 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 PDCD10Q9BUL8 212 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 C20orf27Q9GZN8 174 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 POPDC3Q9HBV1 291 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 MED11Q9P086 117 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 DHCR7Q9UBM7 475 aaKnown RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 SLC23A2Q9UGH3 650 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ERG28Q9UKR5 140 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TBX21Q9UL17 535 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ANAPC10Q9UM13 185 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ARHGEF11O15085 1522 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ATRNO75882 1429 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 KIF26AQ9ULI4 1882 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 DOCK6Q96HP0 2047 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 LRP4O75096 1905 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 TMED7-TICAM2A0A0A6YYA0 188 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 IGHV1-69-2A0A0G2JMI3 117 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 A0A0X1KG70 313 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 DUXBA0A1W2PPF3 345 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 RIIAD1A6NNX1 92 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 DNASE2O00115 360 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PIRO00625 290 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 MRASO14807 208 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 COX7A2P2O60397 106 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 GGCTO75223 188 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 IFNA7P01567 189 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 FABP3P05413 133 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 SOD3P08294 240 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 SCTP09683 121 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 IL1RNP18510 177 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PPIBP23284 216 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 IL3RAP26951 378 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PPP1CCP36873 323 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ATP5G3P48201 142 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PSMB3P49720 205 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PPP1CAP62136 330 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 RPL23P62829 140 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 CRADDP78560 199 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 MRPS10P82664 201 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 RELAQ04206 551 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 FABP9Q0Z7S8 132 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 RBMY1FQ15415 496 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 CST6Q15828 149 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 GUCA2BQ16661 112 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ABCA11PQ4W5N1 156 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ORMDL2Q53FV1 153 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM69Q5SWH9 247 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 FAM19A3Q7Z5A8 133 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 DEFB128Q7Z7B8 93 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PRNTQ86SH4 94 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 MDP1Q86V88 176 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PDZD9Q8IXQ8 264 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 EXOC3-AS1Q8N2X6 119 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF664Q8N3J9 261 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 DRAM1Q8N682 238 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM75Q8N9X5 138 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 OR52P1PQ8NH57 321 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ARL11Q969Q4 196 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 PLA2G2FQ9BZM2 168 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00470Q9BZP3 86 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 COMMD5Q9GZQ3 224 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 FAIMQ9NVQ4 179 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM38BQ9NVV0 291 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 TAAR3PQ9P1P4 343 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 SETD1AO15047 1707 aaKnown RBP2.41□□□□□ -2.02
BRCA1-229ENST00000621897 ADAMTSL1Q8N6G6 1762 aa2.41□□□□□ -2.02
BRCA1-229ENST00000621897 KIF13BQ9NQT8 1826 aa2.4□□□□□ -2.02
BRCA1-229ENST00000621897 TCOF1Q13428 1488 aaKnown RBP2.4□□□□□ -2.02
BRCA1-229ENST00000621897 NEO1Q92859 1461 aa2.4□□□□□ -2.02
BRCA1-229ENST00000621897 RAPGEF2Q9Y4G8 1499 aa2.4□□□□□ -2.02
BRCA1-229ENST00000621897 OTOFQ9HC10 1997 aa2.4□□□□□ -2.02
BRCA1-229ENST00000621897 SCN10AQ9Y5Y9 1956 aa2.4□□□□□ -2.02
BRCA1-229ENST00000621897 LOC102725191A0A1B0GVB3 256 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 C9JAW5 83 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 H3BSA7 217 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 M0R1X1 148 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 HLA-DQB2P05538 268 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 KDELR1P24390 212 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 EVX1P49640 407 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 TAS2R30P59541 319 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 NCS1P62166 190 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 HERVK_113P63121 156 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 REG3AQ06141 175 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 RHEBQ15382 184 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 MMDQ15546 238 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-229ENST00000621897 OCIAD2Q56VL3 154 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 DNAJC24Q6P3W2 148 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 LINC00596Q86U02 117 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 TMEM229BQ8NBD8 167 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 TSTD1Q8NFU3 115 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 OR51T1Q8NGJ9 327 aa2.4□□□□□ -2.03
BRCA1-229ENST00000621897 OR2T27Q8NH04 317 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms