RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PARD6GQ9BYG4 376 aaPredicted RBP17.58■□□□□ 0.4
SGMS1-210ENST00000619438 FAM234AQ9H0X4 552 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 C7orf69Q9H7B7 122 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.58■□□□□ 0.4
SGMS1-210ENST00000619438 PSG11Q9UQ72 335 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 GAB2Q9UQC2 676 aa17.58■□□□□ 0.4
SGMS1-210ENST00000619438 IGHV3-43A0A0B4J1X8 118 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 BTBD17A6NE02 478 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 AGPAT2O15120 278 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 S1PR2O95136 353 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 IFNA5P01569 189 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 OR8U8P0C7N1 319 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 IGHV3-43DP0DP04 118 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 UBE2KP61086 200 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 ZNRF1Q8ND25 227 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 SMDT1Q9H4I9 107 aa17.57■□□□□ 0.4
SGMS1-210ENST00000619438 LOC105371267A0A1B0GV96 52 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 ST8SIA5O15466 376 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 HBG1P69891 147 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 HBG2P69892 147 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 GUK1Q16774 197 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 LYPD2Q6UXB3 125 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 FAM213BQ8TBF2 198 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 GNG12Q9UBI6 72 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 CLN8Q9UBY8 286 aa17.56■□□□□ 0.4
SGMS1-210ENST00000619438 LINC00473A8K010 186 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 C9JQL5 133 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 H3BP45 60 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 J3QLI3 93 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 NDUFA2O43678 99 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 KRASP01116 189 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 IAPPP10997 89 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 G6PCP35575 357 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 GPR12P47775 334 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 Q3ZCU0 254 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TEX36Q5VZQ5 186 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TEX29Q8N6K0 151 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 PBDC1Q9BVG4 233 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 CALYQ9NYX4 217 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 KPTNQ9Y664 436 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 PPIAL4CA0A0B4J2A2 164 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 FAM90A9PA6NNJ1 464 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TSPAN4O14817 238 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 RBFOX2O43251 390 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■■■□ 23.3
SGMS1-210ENST00000619438 DUTP33316 252 aaKnown RBP17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TMEM267Q0VDI3 215 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-210ENST00000619438 ZNF816Q0VGE8 651 aaPredicted RBP17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TMEM30BQ3MIR4 351 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 TMEM14EPQ6UXP3 125 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 LINC00574Q9H8X3 128 aa17.55■□□□□ 0.4
SGMS1-210ENST00000619438 FAM74A7A6NL05 159 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 GYPAP02724 150 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 AARDQ4LEZ3 155 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 FAM74A3Q4VXF1 159 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 BTNL3Q6UXE8 466 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 ZNF788Q6ZQV5 615 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 PSMG3Q9BT73 122 aaPredicted RBP17.54■□□□□ 0.4
SGMS1-210ENST00000619438 RBKSQ9H477 322 aa17.54■□□□□ 0.4
SGMS1-210ENST00000619438 LOC105371242A0A075B767 164 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 PROP1O75360 226 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 RAB7AP51149 207 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 EDDM3BP56851 147 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 OR2B11Q5JQS5 317 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 DHRS7BQ6IAN0 325 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-210ENST00000619438 HAPLN4Q86UW8 402 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 GAFA1Q96PS6 74 aa17.53■□□□□ 0.4
SGMS1-210ENST00000619438 POLR3KQ9Y2Y1 108 aaPredicted RBP17.53■□□□□ 0.4
SGMS1-210ENST00000619438 KBTBD11-OT1A0A1B0GTJ5 212 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 LY86O95711 162 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 AVPP01185 164 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 METTL15P1P0C7V9 234 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 ARL16Q0P5N6 197 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 C17orf58Q2M2W7 97 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 AKR1C8PQ5T2L2 129 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 SPSB3Q6PJ21 355 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 H2BFWTQ7Z2G1 175 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-210ENST00000619438 CORO2AQ92828 525 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 CIB3Q96Q77 187 aaPredicted RBP17.52■□□□□ 0.4
SGMS1-210ENST00000619438 IFI27L2Q9H2X8 130 aa17.52■□□□□ 0.4
SGMS1-210ENST00000619438 COL6A5A8TX70 2615 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 ARHGAP32A7KAX9 2087 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 TMPRSS2O15393 492 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 HPRT1P00492 218 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 KIR2DS2P43631 304 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 RUNX1Q01196 453 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 SCGB2A2Q13296 93 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 LRRC75BQ2VPJ9 315 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 WDR25Q64LD2 544 aaPredicted RBP17.52■□□□□ 0.39
SGMS1-210ENST00000619438 NCR3LG1Q68D85 454 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 NANPQ8TBE9 248 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 SCGB1C1Q8TD33 95 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 GFOD1Q9NXC2 390 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 RFNGQ9Y644 331 aa17.52■□□□□ 0.39
SGMS1-210ENST00000619438 WNK2Q9Y3S1 2297 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 TRGV10A0A0A0MS01 117 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 TRAV1-1A0A0B4J248 108 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 H2AFB1P0C5Y9 115 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 ATP6V1FQ16864 119 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 C1orf229Q6ZS94 237 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms