RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 AGFG2O95081 481 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 ZNF324BQ6AW86 544 aaPredicted RBP17.34■□□□□ 0.37
PCSK6-217ENST00000618548 SGK494Q96LW2 274 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 CGAP01215 116 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 SSPNQ14714 243 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 SAP30LQ9HAJ7 183 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 C12orf77C9JDV5 145 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 SMPD2O60906 423 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 IGKV1-5P01602 117 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 PLPPR1Q8TBJ4 325 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 ST6GALNAC6Q969X2 333 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 MAP1LC3CQ9BXW4 147 aa17.34■□□□□ 0.37
PCSK6-217ENST00000618548 TRAV24A0A0B4J272 114 aa17.33■□□□□ 0.37
PCSK6-217ENST00000618548 M0R1B8 84 aa17.33■□□□□ 0.37
PCSK6-217ENST00000618548 RPL24P83731 157 aaKnown RBP17.33■□□□□ 0.37
PCSK6-217ENST00000618548 ACTL10Q5JWF8 245 aa17.33■□□□□ 0.37
PCSK6-217ENST00000618548 FBXW9Q5XUX1 488 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 STPG3Q8N7X2 389 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 PDPNQ86YL7 162 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 OR2M7Q8NG81 312 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 DEPPQ9NTK1 212 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 TCF19Q9Y242 345 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 CACNA1GO43497 2377 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 TRIOBPQ9H2D6 2365 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 ISLRO14498 428 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 HIST1H1EP10412 219 aaKnown RBP17.33■□□□□ 0.36
PCSK6-217ENST00000618548 COX6A1P12074 109 aa17.33■□□□□ 0.36
PCSK6-217ENST00000618548 AMY1AP04745 511 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 WNT9BO14905 357 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 PLAUP00749 431 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 P01737 135 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 KIR2DS2P43631 304 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 RNASEH2CQ8TDP1 164 aaKnown RBP17.32■□□□□ 0.36
PCSK6-217ENST00000618548 TMEM140Q9NV12 185 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 DOCK10Q96BY6 2186 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 IGHV3OR15-7A0A075B7D8 119 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 IFITM10A6NMD0 228 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 UCP2P55851 309 aa17.32■□□□□ 0.36
PCSK6-217ENST00000618548 POLR3KQ9Y2Y1 108 aaPredicted RBP17.32■□□□□ 0.36
PCSK6-217ENST00000618548 IGLV3-32A0A0A0MS00 114 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 A0A0G2JMM0 328 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 A0A1W2PPB8 328 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 A0A1W2PRS3 328 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 NKX6-3A6NJ46 265 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 KIR3DP1A8MWS1 328 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 C19orf35Q6ZS72 473 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 MS4A5Q9H3V2 200 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 SH3BGRL2Q9UJC5 107 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 TMEM11P17152 192 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 PAX9P55771 341 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 CT55Q8WUE5 264 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 OR8B2Q96RD0 313 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 TRBV9A0A0B4J1U6 114 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 TRA2AQ13595 282 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCSK6-217ENST00000618548 OR1B1Q8NGR6 318 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 BCL2L2Q92843 193 aaPredicted RBP17.31■□□□□ 0.36
PCSK6-217ENST00000618548 TMEM45BQ96B21 275 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 PI4KAP42356 2102 aa17.31■□□□□ 0.36
PCSK6-217ENST00000618548 CNIH1O95406 144 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 COL8A1P27658 744 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 RNASE7Q9H1E1 156 aaKnown RBP17.3■□□□□ 0.36
PCSK6-217ENST00000618548 IL6RP08887 468 aaPredicted RBP17.3■□□□□ 0.36
PCSK6-217ENST00000618548 PRDX2P32119 198 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 OR51B2Q9Y5P1 312 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 IGLV3-12A0A075B6K2 115 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 TEX50A0A1B0GTY4 177 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 LEPROTL1O95214 131 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 FOXA3P55318 350 aaPredicted RBP17.3■□□□□ 0.36
PCSK6-217ENST00000618548 OR1L4Q8NGR5 311 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 RND1Q92730 232 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 LEAP2Q969E1 77 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 HS3ST6Q96QI5 342 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 BPIFA4PQ86YQ2 179 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 NABP2Q9BQ15 211 aa17.3■□□□□ 0.36
PCSK6-217ENST00000618548 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 NCOA6Q14686 2063 aaPredicted RBP17.29■□□□□ 0.36
PCSK6-217ENST00000618548 S100A7P31151 101 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 PTGDSP41222 190 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 UQCRFS1P47985 274 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ZNF355PQ9NSJ1 428 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 WNK2Q9Y3S1 2297 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 NPSP0C0P6 89 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ZNF83P51522 516 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ZNF726P1Q15940 193 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 DYNLRB1Q9NP97 96 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 DECR2Q9NUI1 292 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 FLYWCH2Q96CP2 140 aaKnown RBP17.29■□□□□ 0.36
PCSK6-217ENST00000618548 HES7Q9BYE0 225 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 PRNDQ9UKY0 176 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ARHGAP21Q5T5U3 1957 aa17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ZNF106Q9H2Y7 1883 aaKnown RBP17.29■□□□□ 0.36
PCSK6-217ENST00000618548 ANOS1P23352 680 aa17.28■□□□□ 0.36
PCSK6-217ENST00000618548 C10orf113Q5VZT2 155 aa17.28■□□□□ 0.36
PCSK6-217ENST00000618548 OR8B3Q8NGG8 313 aa17.28■□□□□ 0.36
PCSK6-217ENST00000618548 PAXXQ9BUH6 204 aa17.28■□□□□ 0.36
PCSK6-217ENST00000618548 SLC25A34Q6PIV7 304 aa17.28■□□□□ 0.36
PCSK6-217ENST00000618548 ALKBH7Q9BT30 221 aaPredicted RBP17.28■□□□□ 0.36
PCSK6-217ENST00000618548 LPAR2Q9HBW0 351 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms