RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNF735P0CB33 412 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 AKAIN1P0CW23 69 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 SPNP16150 400 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 PLGLAQ15195 96 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 DHRS11Q6UWP2 260 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 OR4C16Q8NGL9 310 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 OR5H2Q8NGV7 314 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 ADTRPQ96IZ2 230 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 RCHY1Q96PM5 261 aa14.61□□□□□ -0.07
CDX1-202ENST00000616154 IGHV4OR15-8A0A075B7B6 117 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 A0A087WW49 117 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 RAB3DO95716 219 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 RRASP10301 218 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 GP9P14770 177 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 DUTP33316 252 aaKnown RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 RFX2P48378 723 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 ARPC4P59998 168 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 RPS16P62249 146 aaKnown RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 SSBP2P81877 361 aaPredicted RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 TMEM267Q0VDI3 215 aaPredicted RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 MEF2DQ14814 521 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 AKIRIN2Q53H80 203 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 RNASE10Q5GAN6 216 aaKnown RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 ACSM6Q6P461 480 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 ARRDC1Q8N5I2 433 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 OR4D10Q8NGI6 311 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 MUC7Q8TAX7 377 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 ABHD5Q8WTS1 349 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 CASTOR1Q8WTX7 329 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 C7orf50Q9BRJ6 194 aaKnown RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 TINAGL1Q9GZM7 467 aaPredicted RBP14.6□□□□□ -0.07
CDX1-202ENST00000616154 HRASLSQ9HDD0 168 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 SLC2A8Q9NY64 477 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 TBC1D24Q9ULP9 559 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 OR2W1Q9Y3N9 320 aa14.6□□□□□ -0.07
CDX1-202ENST00000616154 M0QYG6 137 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 CA2P00918 260 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 PMP2P02689 132 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 FRMD6-AS1P0C7T7 363 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 ASAH1Q13510 395 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 PPP1R27Q86WC6 154 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 ZNF645Q8N7E2 425 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 GIMAP1Q8WWP7 306 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 ARPC1AQ92747 370 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 EHFQ9NZC4 300 aa14.59□□□□□ -0.07
CDX1-202ENST00000616154 SLC25A17O43808 307 aa14.58□□□□□ -0.08
CDX1-202ENST00000616154 SLC22A5O76082 557 aa14.58□□□□□ -0.08
CDX1-202ENST00000616154 IGLV2-14P01704 120 aa14.58□□□□□ -0.08
CDX1-202ENST00000616154 HSPB1P04792 205 aaKnown RBP14.58□□□□□ -0.08
CDX1-202ENST00000616154 RTL8BQ17RB0 113 aa14.58□□□□□ -0.08
CDX1-202ENST00000616154 ZNF57Q68EA5 555 aaPredicted RBP14.58□□□□□ -0.08
CDX1-202ENST00000616154 LHFPL1Q86WI0 220 aa14.58□□□□□ -0.08
CDX1-202ENST00000616154 RBM7Q9Y580 266 aaKnown RBP14.58□□□□□ -0.08
CDX1-202ENST00000616154 NAP1L6A6NFF2 107 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 LINC00473A8K010 186 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 ARPC1BO15143 372 aaKnown RBP14.57□□□□□ -0.08
CDX1-202ENST00000616154 IGHV3-11P01762 117 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 BTCP35070 178 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 FAUP35544 74 aaKnown RBP14.57□□□□□ -0.08
CDX1-202ENST00000616154 INPP1P49441 399 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 EIF4EBP1Q13541 118 aaPredicted RBP14.57□□□□□ -0.08
CDX1-202ENST00000616154 MRGPRG-AS1Q2M3A8 158 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 CASC10Q5T4H9 136 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 UNQ5815/PRO19632Q6UWF5 114 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 RHOVQ96L33 236 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 HARBI1Q96MB7 349 aa14.57□□□□□ -0.08
CDX1-202ENST00000616154 FAM103A1Q9BTL3 118 aaKnown RBP14.57□□□□□ -0.08
CDX1-202ENST00000616154 RYR2Q92736 4967 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 SRRM4A7MD48 611 aaKnown RBP14.56□□□□□ -0.08
CDX1-202ENST00000616154 BRI3O95415 125 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 NFYAP23511 347 aaPredicted RBP14.56□□□□□ -0.08
CDX1-202ENST00000616154 TPPP2P59282 170 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 MSMO1Q15800 293 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 FAAP20Q6NZ36 180 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 BVESQ8NE79 360 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 LFNGQ8NES3 379 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 OSR1Q8TAX0 266 aaPredicted RBP14.56□□□□□ -0.08
CDX1-202ENST00000616154 MRGPRFQ96AM1 343 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 SLA2Q9H6Q3 261 aa14.56□□□□□ -0.08
CDX1-202ENST00000616154 IGKV1D-13A0A0B4J2D9 117 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 LYRM1O43325 122 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 IGKV1-13P0DP09 117 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 FCGR2CP31995 323 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 UBE2KP61086 200 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 CBX3Q13185 183 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 FXYD3Q14802 87 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 AADACL3Q5VUY0 350 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 TEX45Q8NA69 505 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 OR6F1Q8NGZ6 308 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 MOB3AQ96BX8 217 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 TMEM68Q96MH6 324 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 MS4A10Q96PG2 267 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 OR4C12Q96R67 309 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 PRRT1Q99946 306 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 ZMAT4Q9H898 229 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 TENM2Q9NT68 2774 aa14.55□□□□□ -0.08
CDX1-202ENST00000616154 SACSQ9NZJ4 4579 aa14.54□□□□□ -0.08
CDX1-202ENST00000616154 DISC1C4P0D8 188 aa14.54□□□□□ -0.08
CDX1-202ENST00000616154 H3BUA1 57 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms