RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CLDN15P56746 228 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 GTF2H5Q6ZYL4 71 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 OR4F17Q8NGA8 305 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 OR5A2Q8NGI9 324 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 LSM10Q969L4 123 aaKnown RBP8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 OR2D2Q9H210 308 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 WDR54Q9H977 334 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 CELSR3Q9NYQ7 3312 aa8.73□□□□□ -1.01
TNFAIP3-208ENST00000615468 FBLL1A6NHQ2 334 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 B4GALT1P15291 398 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 GATA2P23769 480 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 BVES-AS1Q5T3Y7 98 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 PQLC2Q6ZP29 291 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 FGF21Q9NSA1 209 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 TECRQ9NZ01 308 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 C7orf71A4D174 169 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 FAM181BA6NEQ2 426 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 BMPR1BO00238 502 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 DUX1O43812 170 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 CLDN14O95500 239 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 PLP1P60201 277 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 PSG7Q13046 419 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 FAM71F2Q6NXP2 309 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 MED12LQ86YW9 2145 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 OR1F12Q8NHA8 337 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 NEUROG1Q92886 237 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 LMO7DNF2Z398 122 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 K7EN84 100 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 NDUFS8O00217 210 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 CA1P00915 261 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 HLA-DQA1P01909 254 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 GPR6P46095 362 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 LYSMD4Q5XG99 296 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 TMEM14EPQ6UXP3 125 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 SPEM1Q8N4L4 309 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 STPG3Q8N7X2 389 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 ZNF488Q96MN9 340 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 MCRIP2Q9BUT9 160 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 SFXN3Q9BWM7 321 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 SSBP3Q9BWW4 388 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 TRAPPC2LQ9UL33 140 aa8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 MUC22E2RYF6 1773 aaPredicted RBP8.72□□□□□ -1.01
TNFAIP3-208ENST00000615468 ACTL6BO94805 426 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 CELA3BP08861 270 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 CTSSP25774 331 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 HOXC12P31275 282 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 SSTR5P35346 364 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 NXPH1P58417 271 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 MIC13Q5XKP0 118 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 GUSBP11Q6P575 273 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 OR8B3Q8NGG8 313 aa8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 NANOS1Q8WY41 292 aaKnown RBP8.71□□□□□ -1.01
TNFAIP3-208ENST00000615468 TRAV9-1A0A075B6T8 112 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 HELTA6NFD8 242 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 ZNF32P17041 273 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 EBLN2Q6P2I7 272 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 OR1L3Q8NH93 324 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 RAB37Q96AX2 223 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 ATG2AQ2TAZ0 1938 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 A0A1W2PR77 199 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 MFAP2P55001 183 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 TCTAP57738 103 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 DEFB125Q8N687 156 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 EAF1Q96JC9 268 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
TNFAIP3-208ENST00000615468 M0R296 226 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 AMY1AP04745 511 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 CD1BP29016 333 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 RPL8P62917 257 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 TMEM136Q6ZRR5 245 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 NHLRC2Q8NBF2 726 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 DOCK7Q96N67 2140 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 CXorf1O96002 111 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 IGLV3-1P01715 115 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 DCAF12Q5T6F0 453 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 WDR74Q6RFH5 385 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 SSX8Q7RTT4 187 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 H2BFWTQ7Z2G1 175 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 PLXDC1Q8IUK5 500 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 GP6Q9HCN6 339 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 ABI3Q9P2A4 366 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 PCDH15Q96QU1 1955 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 IGHV1OR21-1A0A087WYE8 117 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 A0A1B0GV72 72 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 SH2D7A6NKC9 451 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 H3BUT2 72 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 LAMTOR5O43504 91 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 CA6P23280 308 aa8.7□□□□□ -1.02
TNFAIP3-208ENST00000615468 CRYBB3P26998 211 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms