RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 WASHC3Q9Y3C0 194 aa7.4□□□□□ -1.23
VPS11-206ENST00000614944 CSDC2Q9Y534 153 aaKnown RBP7.4□□□□□ -1.23
VPS11-206ENST00000614944 MED12LQ86YW9 2145 aa7.4□□□□□ -1.23
VPS11-206ENST00000614944 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
VPS11-206ENST00000614944 CD5LO43866 347 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 CA7P43166 264 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 KRTDAPP60985 99 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 TIMM23BQ5SRD1 257 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 WDR31Q8NA23 367 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 OR4F17Q8NGA8 305 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 OR5D14Q8NGL3 314 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 FGFBP3Q8TAT2 258 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 OR4F4Q96R69 305 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 TTTY10Q9BZA0 68 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 Q9N2K0 584 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
VPS11-206ENST00000614944 SLC17A2O00624 439 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 LILRA1O75019 489 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 SRSF1Q07955 248 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS11-206ENST00000614944 ADIRFQ15847 76 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 SPSB3Q6PJ21 355 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 LYZL4Q96KX0 146 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 PPDPFQ9H3Y8 114 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 HS3ST1O14792 307 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 GPM6AP51674 278 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 HIST1H1AQ02539 215 aaPredicted RBP7.39□□□□□ -1.23
VPS11-206ENST00000614944 SSBP1Q04837 148 aaKnown RBP7.39□□□□□ -1.23
VPS11-206ENST00000614944 MPV17L2Q567V2 206 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 PCSK4Q6UW60 755 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 AP1S3Q96PC3 154 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 SAMD10Q9BYL1 202 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 GCM1Q9NP62 436 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 MANBALQ9NQG1 85 aa7.39□□□□□ -1.23
VPS11-206ENST00000614944 CACNA1CQ13936 2221 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 BORCS7-ASMTA0A0B4J1R7 106 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 MEIS3P1A6NDR6 274 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 C1QL1O75973 258 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 FOXF2Q12947 444 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 NEU4Q8WWR8 484 aaPredicted RBP7.38□□□□□ -1.23
VPS11-206ENST00000614944 SERTAD4Q9NUC0 356 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 KIAA1456Q9P272 454 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 CUL9Q8IWT3 2517 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 A0A1B0GUS0 222 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 ANKRD30BLA7E2S9 258 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 ADRA2CP18825 462 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 GNG4P50150 75 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 MSMO1Q15800 293 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 TBC1D28Q2M2D7 210 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 FAM57BQ71RH2 274 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 SLC25A40Q8TBP6 338 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 MARCH1Q8TCQ1 289 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 CST11Q9H112 138 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 GPR84Q9NQS5 396 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 SLC25A15Q9Y619 301 aa7.38□□□□□ -1.23
VPS11-206ENST00000614944 NCOA6Q14686 2063 aaPredicted RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 TEX48A0A1B0GUV7 120 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 P2RY10O00398 339 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 CD55P08174 381 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 RPL12P30050 165 aaKnown RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 FCGR2CP31995 323 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 PRSS3P35030 304 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 GALR1P47211 349 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 FOXG1P55316 489 aaPredicted RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 ICAM4Q14773 271 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 C12orf54Q6X4T0 127 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 OR10V1Q8NGI7 309 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 OR51A4Q8NGJ6 313 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 OR51G1Q8NGK1 321 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 OR10AC1Q8NH08 325 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 OR51E1Q8TCB6 317 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 TRAV8-7A0A075B6U6 113 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 A0A0G2JNJ9 132 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 ZNF503-AS2A6NEH8 195 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 HBZP02008 142 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 ADH4P08319 380 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 GATA4P43694 442 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 NPBWR2P48146 333 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 PAX9P55771 341 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 ZNF506Q5JVG8 444 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 MDP1Q86V88 176 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 DUX5Q96PT3 197 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 Q9UFV3 132 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 SPEGQ15772 3267 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 CNOT1A5YKK6 2376 aaKnown RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 TRAV38-1A0A0B4J264 116 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 MDH2P40926 338 aaKnown RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 MALLQ13021 153 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 FFAR4Q5NUL3 377 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 GLYATL3Q5SZD4 288 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 BVES-AS1Q5T3Y7 98 aa7.37□□□□□ -1.23
VPS11-206ENST00000614944 ZNF474Q6S9Z5 364 aaPredicted RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 CXorf67Q86X51 503 aaPredicted RBP7.37□□□□□ -1.23
VPS11-206ENST00000614944 FAM219AQ8IW50 185 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms