RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 LRP4O75096 1905 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 APOA2P02652 100 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 IGHV1-2P23083 117 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 SLC24A4Q8NFF2 622 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 DAZAP1Q96EP5 407 aaKnown RBP10.51□□□□□ -0.73
MSH6-213ENST00000614496 OPN3Q9H1Y3 402 aaPredicted RBP10.51□□□□□ -0.73
MSH6-213ENST00000614496 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 HSBP1O75506 76 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 UBE2G1P62253 170 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 PLGLAQ15195 96 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
MSH6-213ENST00000614496 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 HLA-DRB5Q30154 266 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 SLC35E4Q6ICL7 350 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 TMEM14EPQ6UXP3 125 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 ACP7Q6ZNF0 438 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 TMEM170AQ8WVE7 144 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 TRIOO75962 3097 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 NKX2-8O15522 239 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 OR9G9P0C7N8 305 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 CRYBB3P26998 211 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 REG1BP48304 166 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 OR5I1Q13606 314 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 VWA1Q6PCB0 445 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 C22orf15Q8WYQ4 148 aa10.51□□□□□ -0.73
MSH6-213ENST00000614496 J3QR06 171 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 COX7A2P2O60397 106 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 PQLC2Q6ZP29 291 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 TGIF2LYQ8IUE0 185 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 TMEM256Q8N2U0 113 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 RRHO14718 337 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 APELAP0DMC3 54 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
MSH6-213ENST00000614496 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 OR2V2Q96R30 315 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 TPPP3Q9BW30 176 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 MRPS18CQ9Y3D5 142 aaKnown RBP10.5□□□□□ -0.73
MSH6-213ENST00000614496 IFITM10A6NMD0 228 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 OR4A8P0C604 315 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 GZMBP10144 247 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 GATA2P23769 480 aaPredicted RBP10.5□□□□□ -0.73
MSH6-213ENST00000614496 RND2P52198 227 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 CASP6P55212 293 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 RANP62826 216 aaKnown RBP10.5□□□□□ -0.73
MSH6-213ENST00000614496 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
MSH6-213ENST00000614496 STUMQ69YW2 141 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 TRAT1Q6PIZ9 186 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 ZNF664Q8N3J9 261 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 OR10X1Q8NGY0 326 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 TMEM68Q96MH6 324 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 MED12LQ86YW9 2145 aa10.5□□□□□ -0.73
MSH6-213ENST00000614496 CD82P27701 267 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 KLF3P57682 345 aaPredicted RBP10.49□□□□□ -0.73
MSH6-213ENST00000614496 LINC00473A8K010 186 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 VENTXO95231 258 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 OPRK1P41145 380 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 TAS2R60P59551 318 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 GNB1P62873 340 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 WFDC8Q8IUA0 241 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 CGAP01215 116 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 CHD3Q12873 2000 aaKnown RBP10.49□□□□□ -0.73
MSH6-213ENST00000614496 Q6ZSR3 168 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 STPG3Q8N7X2 389 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 FAM122AQ96E09 287 aa10.49□□□□□ -0.73
MSH6-213ENST00000614496 MGST3O14880 152 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 PLAUP00749 431 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 PFN1P07737 140 aaKnown RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 GCHFRP30047 84 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 TNFAIP6P98066 277 aaPredicted RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 UNQ6494/PRO21346Q6UXR6 183 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 SGK494Q96LW2 274 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 TECRQ9NZ01 308 aaKnown RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 TMPRSS2O15393 492 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 CECR9P0C854 216 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 RAB7AP51149 207 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 WDR86Q86TI4 376 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 CCL13Q99616 98 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 NDUFAF3Q9BU61 184 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 DYNLRB1Q9NP97 96 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 SPRR3Q9UBC9 169 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 TRAV17A0A0B4J275 112 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 LNP1A1A4G5 178 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 MPDU1O75352 247 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
MSH6-213ENST00000614496 GNB2P62879 340 aa10.48□□□□□ -0.73
MSH6-213ENST00000614496 FOXF2Q12947 444 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms