RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 TMEM106BQ9NUM4 274 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
CNOT3-208ENST00000613073 RBX1P62877 108 aa13.75□□□□□ -0.21
CNOT3-208ENST00000613073 TRAV34A0A0B4J273 112 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 UBE2L5PA0A1B0GUS4 154 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 PGPEP1LA6NFU8 196 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 AESQ08117 197 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 COL5A1-AS1Q5SY13 56 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 PPP1R3CQ9UQK1 317 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 PLCE1Q9P212 2302 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 KITLGP21583 273 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 PTTG1IPP53801 180 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 TPTE2P1Q5T6R2 138 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 FAM53AQ6NSI3 398 aaPredicted RBP13.74□□□□□ -0.21
CNOT3-208ENST00000613073 RPP25LQ8N5L8 163 aaKnown RBP13.74□□□□□ -0.21
CNOT3-208ENST00000613073 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
CNOT3-208ENST00000613073 C20orf202A1L168 122 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 TMEM183BQ1AE95 376 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 AARDQ4LEZ3 155 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 TPRX1Q8N7U7 411 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 OR10V1Q8NGI7 309 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 C22orf15Q8WYQ4 148 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-208ENST00000613073 HES4Q9HCC6 221 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 SH3BGRL2Q9UJC5 107 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 HNF1AP20823 631 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 CEACAM8P31997 349 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-208ENST00000613073 ADMP35318 185 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 PSMB3P49720 205 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 RPS16P62249 146 aaKnown RBP13.73□□□□□ -0.21
CNOT3-208ENST00000613073 FAM27E3Q08E93 113 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 KCNIP4Q6PIL6 250 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF525Q8N782 197 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF709Q8N972 641 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
CNOT3-208ENST00000613073 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 KCNS2Q9ULS6 477 aa13.73□□□□□ -0.21
CNOT3-208ENST00000613073 ROS1P08922 2347 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 CCL25O15444 150 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 CRYAAP02489 173 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 SAPCD1Q5SSQ6 148 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 ACP7Q6ZNF0 438 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 Q6ZRM9 215 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 C22orf34Q6ZV56 151 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 STPG4Q8N801 248 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 OR1L6Q8NGR2 347 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 C20orf144Q9BQM9 153 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 COL25A1Q9BXS0 654 aaPredicted RBP13.72□□□□□ -0.21
CNOT3-208ENST00000613073 HIPK2Q9H2X6 1198 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 PSG2P11465 335 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 ZNF16P17020 682 aaPredicted RBP13.72□□□□□ -0.21
CNOT3-208ENST00000613073 F2RP25116 425 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 UCP1P25874 307 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 MBNL2Q5VZF2 373 aaKnown RBP13.72□□□□□ -0.21
CNOT3-208ENST00000613073 OR4C12Q96R67 309 aa13.72□□□□□ -0.21
CNOT3-208ENST00000613073 PAGE4O60829 102 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 RPL15P61313 204 aaKnown RBP13.71□□□□□ -0.21
CNOT3-208ENST00000613073 TIMM23BQ5SRD1 257 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 SCNM1Q9BWG6 230 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 PSENENQ9NZ42 101 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 TLN1Q9Y490 2541 aaKnown RBP13.71□□□□□ -0.21
CNOT3-208ENST00000613073 F2Z2F3 143 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 IGLV2-14P01704 120 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 MOB1BQ7L9L4 216 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 OR1L1Q8NH94 360 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 AGMATQ9BSE5 352 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
CNOT3-208ENST00000613073 H0Y980 276 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 C1QTNF9P0C862 333 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 S100GP29377 79 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 TIMP3P35625 211 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 GABRA2P47869 451 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 SPRNQ5BIV9 151 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 TEX43Q6ZNM6 134 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 FAM57AQ8TBR7 257 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 LRRC29Q8WV35 223 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 ANAPC16Q96DE5 110 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.22
CNOT3-208ENST00000613073 RNF114Q9Y508 228 aa13.71□□□□□ -0.22
CNOT3-208ENST00000613073 RELNP78509 3460 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 DUXBA0A1W2PPF3 345 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 YPEL1O60688 119 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 SERF1AO75920 110 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 NDUFB8O95169 186 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 SERPINE2P07093 398 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 YPEL2Q96QA6 119 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 TMEM30CPA0ZSE6 113 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 TYMSP04818 313 aa13.7□□□□□ -0.22
CNOT3-208ENST00000613073 SRP14P37108 136 aaKnown RBP13.7□□□□□ -0.22
CNOT3-208ENST00000613073 KRTDAPP60985 99 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms