RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OR5I1Q13606 314 aa11.67□□□□□ -0.54
COL6A1-207ENST00000612273 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
COL6A1-207ENST00000612273 Q8TCH9 128 aa11.67□□□□□ -0.54
COL6A1-207ENST00000612273 GUCD1Q96NT3 240 aa11.67□□□□□ -0.54
COL6A1-207ENST00000612273 SMIM21Q3B7S5 101 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-207ENST00000612273 CIB3Q96Q77 187 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-207ENST00000612273 GCM1Q9NP62 436 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 MANBALQ9NQG1 85 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 C21orf140B9A014 251 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 F6UZH7 168 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 RAB29O14966 203 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 CD59P13987 128 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 CNN1P51911 297 aaKnown RBP11.66□□□□□ -0.54
COL6A1-207ENST00000612273 TCL1AP56279 114 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 TREML4Q6UXN2 200 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 MOGAT3Q86VF5 341 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 CXXC4Q9H2H0 198 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 MDFIC2A0A1B0GVS7 189 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 KITLGP21583 273 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 ERVK-16P61578 105 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 ATP6V1FQ16864 119 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-207ENST00000612273 TAAR6Q96RI8 345 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
COL6A1-207ENST00000612273 DUTP33316 252 aaKnown RBP11.65□□□□□ -0.54
COL6A1-207ENST00000612273 PAX5Q02548 391 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 TMEM178AQ8NBL3 297 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 OR4P4Q8NGL7 312 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 TMEM18Q96B42 140 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 SNRNP40Q96DI7 357 aaKnown RBP11.65□□□□□ -0.54
COL6A1-207ENST00000612273 ZDHHC11Q9H8X9 412 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 ZNF90Q03938 601 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 MLANAQ16655 118 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 HLA-DRB5Q30154 266 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 LYG1Q8N1E2 194 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 TMEM170AQ8WVE7 144 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 S1PR3Q99500 378 aa11.65□□□□□ -0.54
COL6A1-207ENST00000612273 ABCA4P78363 2273 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 CDX4O14627 284 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 EREGO14944 169 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 BATFQ16520 125 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 RND1Q92730 232 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 MGST2Q99735 147 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 LRFN3Q9BTN0 628 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 TIMM9Q9Y5J7 89 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 M0R1B8 84 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 OR10J4P0C629 311 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 P0C879 139 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 KIR2DL2P43627 348 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 RAB4BP61018 213 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 SSX2Q16385 188 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 PEAR1Q5VY43 1037 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 Q6ZT83 130 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 WDR83OSQ9Y284 106 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 YTHDF2Q9Y5A9 579 aaKnown RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 IGKV1D-17A0A075B6S4 117 aa11.64□□□□□ -0.55
COL6A1-207ENST00000612273 RPL29P47914 159 aaKnown RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
COL6A1-207ENST00000612273 TGOLN2O43493 480 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 TNFSF10P50591 281 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 FXYD3Q14802 87 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 TEX38Q6PEX7 206 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 WDR31Q8NA23 367 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 SFRP2Q96HF1 295 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 CGAP01215 116 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 ADMP35318 185 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 TGIF2LYQ8IUE0 185 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 ZCCHC24Q8N2G6 241 aaKnown RBP11.63□□□□□ -0.55
COL6A1-207ENST00000612273 Q8N7P7 452 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 NHLRC2Q8NBF2 726 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 TCF19Q9Y242 345 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
COL6A1-207ENST00000612273 A8MWP6 167 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 AHRRA9YTQ3 701 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 F2Z2F3 143 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 MORN2Q502X0 79 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
COL6A1-207ENST00000612273 INO80CQ6PI98 192 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-207ENST00000612273 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
COL6A1-207ENST00000612273 RPRMLQ8N4K4 120 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms