RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RANP62826 216 aaKnown RBP6.11□□□□□ -1.43
CSDE1-218ENST00000610726 LAMTOR1Q6IAA8 161 aa6.11□□□□□ -1.43
CSDE1-218ENST00000610726 OBSL1O75147 1896 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 IGHV3-35A0A0C4DH35 117 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 IGSF23A1L1A6 192 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 FAM90A26D6RGX4 464 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 K7ENP7 123 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 LINC00869P0C866 280 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 FAM106CPP0CH98 169 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 NBL1P41271 181 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 LY6EQ16553 131 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF497Q6ZNH5 498 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 CCL19Q99731 98 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 CLEC5AQ9NY25 188 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 DOCK11Q5JSL3 2073 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 USF1P22415 310 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-218ENST00000610726 TCL1AP56279 114 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 LY6G6FQ5SQ64 297 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 FOXL2NBQ6ZUU3 175 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 CYB561D1Q8N8Q1 229 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 DPF1Q92782 380 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 SRRM5B3KS81 715 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 S100A4P26447 101 aaKnown RBP6.1□□□□□ -1.43
CSDE1-218ENST00000610726 GALR1P47211 349 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 PDLIM4P50479 330 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM42Q69YG0 159 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF880Q6PDB4 577 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 FAM90A1Q86YD7 464 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 WDR31Q8NA23 367 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 PIMREGQ9BSJ6 248 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 CHRDL1Q9BU40 450 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 MANBALQ9NQG1 85 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 METRNQ9UJH8 293 aa6.1□□□□□ -1.43
CSDE1-218ENST00000610726 YLPM1P49750 1951 aaKnown RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 TRAV14DV4A0A0A6YYC5 116 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 H3BQ15 152 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 DLK1P80370 383 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NHLH1Q02575 133 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF788Q6ZQV5 615 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 EAF1Q96JC9 268 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 HS3ST6Q96QI5 342 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 SEC11CQ9BY50 192 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 XKRY2A2RUG3 117 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 RNF222A6NCQ9 220 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NHLRC3Q5JS37 347 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 DHRS7BQ6IAN0 325 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 UNQ5815/PRO19632Q6UWF5 114 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 RAB24Q969Q5 203 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 RNF2Q99496 336 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 FBXL15Q9H469 300 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 LINC00312Q9Y6C7 94 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 ARFGEF3Q5TH69 2177 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NCOA6Q14686 2063 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 ADAMTS9Q9P2N4 1935 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 A0A1W2PNU3 283 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 TM4SF5O14894 197 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 MLNRO43193 412 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 CXorf1O96002 111 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 CAMPP49913 170 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 RND3P61587 244 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NPIPB3Q92617 1050 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 SMIM8Q96KF7 97 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 FAM210BQ96KR6 192 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 P2RX4Q99571 388 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 MRPL20Q9BYC9 149 aaKnown RBP6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NIT2Q9NQR4 276 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 DPM3Q9P2X0 92 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NAT8Q9UHE5 227 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 NAT8BQ9UHF3 227 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 RNF24Q9Y225 148 aa6.09□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 DPRXA6NFQ7 191 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 H0YIZ8 118 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 J3KRW8 73 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 GATCO43716 136 aaKnown RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 RAMP3O60896 148 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 HYPMO75409 117 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 LY6HO94772 140 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 BCL2P10415 239 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 PF4V1P10720 104 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 NAT1P18440 290 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 GNLYP22749 145 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 CD24P25063 80 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 QRFPP83859 136 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 SCGB2A2Q13296 93 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF146Q15072 292 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 MORN2Q502X0 79 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 STPG2Q8N412 459 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 NEU4Q8WWR8 484 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 NEUROG1Q92886 237 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 MS4A10Q96PG2 267 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 FAM103A1Q9BTL3 118 aaKnown RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 TRBV23-1A0A0A0MS06 115 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 FOXH1O75593 365 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 IGKV3-15P01624 115 aa6.08□□□□□ -1.44
CSDE1-218ENST00000610726 RSPO1Q2MKA7 263 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-218ENST00000610726 KHDC3LQ587J8 217 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms