RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 HPRT1P00492 218 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 HSPB1P04792 205 aaKnown RBP10.37□□□□□ -0.75
SENP3-209ENST00000610454 RLN1P04808 185 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 IFNA6P05013 189 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 NQO2P16083 231 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 MAS1LP35410 378 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 RPL27AP46776 148 aaKnown RBP10.37□□□□□ -0.75
SENP3-209ENST00000610454 RPL5P46777 297 aaKnown RBP10.37□□□□□ -0.75
SENP3-209ENST00000610454 TMBIM6P55061 237 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 ERVK-16P61578 105 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 DCTN2Q13561 401 aaKnown RBP10.37□□□□□ -0.75
SENP3-209ENST00000610454 LPCAT3Q6P1A2 487 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 TMEM167AQ8TBQ9 72 aa10.37□□□□□ -0.75
SENP3-209ENST00000610454 TINAGL1Q9GZM7 467 aaPredicted RBP10.37□□□□□ -0.75
SENP3-209ENST00000610454 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 A0A087WW49 117 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 GPR31O00270 319 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 GNRHRP30968 328 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 INSL3P51460 131 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 SLURP1P55000 103 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 TAS2R31P59538 309 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 KRTAP10-11P60412 298 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
SENP3-209ENST00000610454 SPCS2Q15005 226 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 MRGPRG-AS1Q2M3A8 158 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 LYSMD2Q8IV50 215 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 PUSL1Q8N0Z8 303 aaKnown RBP10.36□□□□□ -0.75
SENP3-209ENST00000610454 FCAMRQ8WWV6 532 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 FYTTD1Q96QD9 318 aaKnown RBP10.36□□□□□ -0.75
SENP3-209ENST00000610454 RANGRFQ9HD47 186 aaPredicted RBP10.36□□□□□ -0.75
SENP3-209ENST00000610454 BET1LQ9NYM9 111 aa10.36□□□□□ -0.75
SENP3-209ENST00000610454 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 SAP30O75446 220 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 TPPPO94811 219 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 BRI3O95415 125 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 DHFRP00374 187 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 ZP3P21754 424 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 RNASE10Q5GAN6 216 aaKnown RBP10.35□□□□□ -0.75
SENP3-209ENST00000610454 OR4A47Q6IF82 309 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 ADAD2Q8NCV1 583 aaKnown RBP10.35□□□□□ -0.75
SENP3-209ENST00000610454 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
SENP3-209ENST00000610454 FXYD6Q9H0Q3 95 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 PLEKHA2Q9HB19 425 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 COMMD9Q9P000 198 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 CCDC59Q9P031 241 aaKnown RBP10.35□□□□□ -0.75
SENP3-209ENST00000610454 SCOCQ9UIL1 159 aa10.35□□□□□ -0.75
SENP3-209ENST00000610454 PRKDCP78527 4128 aaKnown RBP10.34□□□□□ -0.75
SENP3-209ENST00000610454 FAM223BA6NKX1 122 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 PGLYRP1O75594 196 aaPredicted RBP10.34□□□□□ -0.75
SENP3-209ENST00000610454 S1PR2O95136 353 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 HLA-GP17693 338 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 TBPP20226 339 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 F2RP25116 425 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 ECI1P42126 302 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 RHOGP84095 191 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 PHLDA2Q53GA4 152 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 ZNF429Q86V71 674 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 FAM223AQ8IWN6 122 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 LAX1Q8IWV1 398 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 SLC38A6Q8IZM9 456 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 OR52I2Q8NH67 350 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 ELOVL1Q9BW60 279 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 COMMD5Q9GZQ3 224 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 C6orf62Q9GZU0 229 aaPredicted RBP10.34□□□□□ -0.75
SENP3-209ENST00000610454 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
SENP3-209ENST00000610454 WI2-2373I1.2A0A1W2PRP0 233 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 CCDC160A6NGH7 325 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 HMX3A6NHT5 357 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 K7EIL1 84 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 M0QYG6 137 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 LY86O95711 162 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 PGAM2P15259 253 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 MRPS10P82664 201 aaKnown RBP10.33□□□□□ -0.76
SENP3-209ENST00000610454 DEFA5Q01523 94 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 ATP5G2Q06055 141 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 TTC9CQ8N5M4 171 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 DGCR14Q96DF8 476 aaKnown RBP10.33□□□□□ -0.76
SENP3-209ENST00000610454 OR4C12Q96R67 309 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 TMEM140Q9NV12 185 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
SENP3-209ENST00000610454 KLK11Q9UBX7 282 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 MTFP1Q9UDX5 166 aa10.33□□□□□ -0.76
SENP3-209ENST00000610454 MARCH11A6NNE9 402 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 NPIPB5A8MRT5 1133 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 GABARAPH6UMI1 98 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 CTDSP2O14595 271 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 PRH1P02810 166 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 CD3DP04234 171 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 ZNF735P0CB33 412 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 DEFA4P12838 97 aa10.32□□□□□ -0.76
SENP3-209ENST00000610454 RPA2P15927 270 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms