RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 UNQ5815/PRO19632Q6UWF5 114 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 NABP2Q9BQ15 211 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 THSD7BQ9C0I4 1608 aa12.06□□□□□ -0.48
PCDHB16-201ENST00000609684 B9A039 149 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 CRYBB3P26998 211 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 STPG3Q8N7X2 389 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 MT-ND6P03923 174 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 PNKDQ8N490 385 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 MGPP08493 103 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 CA2P00918 260 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
PCDHB16-201ENST00000609684 ATXN7O15265 892 aaPredicted RBP12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 ACAA1P09110 424 aaPredicted RBP12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 EGR1P18146 543 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 FXYD3Q14802 87 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 LY6G6FQ5SQ64 297 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 PLPPR1Q8TBJ4 325 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 SPSB4Q96A44 273 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 ABHD17AQ96GS6 310 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 IQCF6A8MYZ5 107 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 H3BTX0 84 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 LIPFP07098 398 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 AGAP20933 346 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 GFRA1P56159 465 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 SPANXN1Q5VSR9 72 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 TBX15Q96SF7 602 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 CEACAM1P13688 526 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 DIRC3C9JPN6 131 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 PF4V1P10720 104 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 PKIAP61925 76 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 ZIC4Q8N9L1 334 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 HIST1H2BAQ96A08 127 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 OR51M1Q9H341 326 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 HSPB7Q9UBY9 170 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 ROS1P08922 2347 aa12.04□□□□□ -0.48
PCDHB16-201ENST00000609684 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 CLPSP04118 112 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 A0A0A6YYD4 124 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 MFAP4P55083 255 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 PEAR1Q5VY43 1037 aaPredicted RBP12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 GTF2H5Q6ZYL4 71 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 RRHO14718 337 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 SGK494Q96LW2 274 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 PCSK4Q6UW60 755 aa12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 MRPL37Q9BZE1 423 aaKnown RBP12.03□□□□□ -0.48
PCDHB16-201ENST00000609684 TRBV23-1A0A0A0MS06 115 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 GCHFRP30047 84 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 CD81P60033 236 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 BSPH1Q075Z2 132 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 TMEM78Q5T7P6 136 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 FAM57AQ8TBR7 257 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 RNF126Q9BV68 326 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 TRBV6-7A0A0A0MS04 114 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 PPOXP50336 477 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 DNM1P46Q6ZS02 220 aa12.02□□□□□ -0.48
PCDHB16-201ENST00000609684 LOC389332A0A1B0GUA5 103 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 MOSP00540 346 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 OR1P1Q8NH06 330 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 TCF20Q9UGU0 1960 aaKnown RBP12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 A8MXK9 166 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 KLRB1Q12918 225 aa12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
PCDHB16-201ENST00000609684 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 CRYGSP22914 178 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 TMEM177Q53S58 311 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 GATAD1Q8WUU5 269 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 METTL26Q96S19 204 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 TMEM56-RWDD3S4R434 201 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 KBTBD11-OT1A0A1B0GTJ5 212 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 TFF3Q07654 80 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 TWIST1Q15672 202 aa12.01□□□□□ -0.49
PCDHB16-201ENST00000609684 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms