RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 PEMTQ9UBM1 199 aa12.13□□□□□ -0.47
SGMS1-209ENST00000609445 TRAV18A0A075B6X5 111 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 KBTBD11O94819 623 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
SGMS1-209ENST00000609445 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
SGMS1-209ENST00000609445 C15orf32Q32M92 178 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 SSX9Q7RTT3 188 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 PUSL1Q8N0Z8 303 aaKnown RBP12.12□□□□□ -0.47
SGMS1-209ENST00000609445 GVQW1Q8N7I0 195 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 NECAP1Q8NC96 275 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 SLC25A38Q96DW6 304 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
SGMS1-209ENST00000609445 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 DMRT1Q9Y5R6 373 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 S4R3C0 116 aa12.12□□□□□ -0.47
SGMS1-209ENST00000609445 TNFSF12O43508 249 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 SCGNO76038 276 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 IGHV3-23P01764 117 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 FCER2P06734 321 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 ARPC4P59998 168 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-209ENST00000609445 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 SECTM1Q8WVN6 248 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 SPATA25Q9BR10 227 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 RETNQ9HD89 108 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 ZNF257Q9Y2Q1 563 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 SELENOKQ9Y6D0 94 aa12.11□□□□□ -0.47
SGMS1-209ENST00000609445 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 AIREO43918 545 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 NDUFB8O95169 186 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 OR2C1O95371 312 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 AREGP15514 252 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 FCGR2CP31995 323 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 IDNKQ5T6J7 187 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 ZNF773Q6PK81 442 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 OR2K2Q8NGT1 345 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 ISOC1Q96CN7 298 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
SGMS1-209ENST00000609445 DPPA5A6NC42 116 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 REG1AP05451 166 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 CD81P60033 236 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 DYNLRB2Q8TF09 96 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 KCTD12Q96CX2 325 aaKnown RBP12.09□□□□□ -0.47
SGMS1-209ENST00000609445 YTHDF1Q9BYJ9 559 aaKnown RBP12.09□□□□□ -0.47
SGMS1-209ENST00000609445 WFDC10AQ9H1F0 79 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 Q9H521 79 aa12.09□□□□□ -0.47
SGMS1-209ENST00000609445 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 GGCTO75223 188 aaKnown RBP12.08□□□□□ -0.48
SGMS1-209ENST00000609445 CD7P09564 240 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 PSMB6P28072 239 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 MAS1LP35410 378 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 CLEC19AQ6UXS0 136 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 OR13F1Q8NGS4 319 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 CCDC140Q96MF4 163 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 NEURL2Q9BR09 285 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 AUNIPQ9H7T9 357 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 ETV7Q9Y603 341 aa12.08□□□□□ -0.48
SGMS1-209ENST00000609445 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 TRAV3A0A0B4J244 114 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 HRASP01112 189 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 PPYP01298 95 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 CRYGCP07315 174 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 FOLR2P14207 255 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 CTRB1P17538 263 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 ARL3P36405 182 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 KIR2DS2P43631 304 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 FXYD4P59646 89 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
SGMS1-209ENST00000609445 NEDD8Q15843 81 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 GUCA2BQ16661 112 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 TIMM50Q3ZCQ8 353 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
SGMS1-209ENST00000609445 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 DEFB125Q8N687 156 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
SGMS1-209ENST00000609445 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 SLC5A7Q9GZV3 580 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 CEPT1Q9Y6K0 416 aa12.07□□□□□ -0.48
SGMS1-209ENST00000609445 LCE6AA0A183 80 aa12.06□□□□□ -0.48
SGMS1-209ENST00000609445 SULT1C2O00338 296 aa12.06□□□□□ -0.48
SGMS1-209ENST00000609445 TPPPO94811 219 aa12.06□□□□□ -0.48
SGMS1-209ENST00000609445 HLA-GP17693 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms