RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MRPS7Q9Y2R9 242 aaKnown RBP10.09□□□□□ -0.79
POLR2J3-219ENST00000608621 DPPA5A6NC42 116 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 LGALS9O00182 355 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 NDUFB8O95169 186 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 CD36P16671 472 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 RPL27AP46776 148 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 BRWD1-AS2P59051 145 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 PUSL1Q8N0Z8 303 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 MFSD4AQ8N468 514 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 NUDCD2Q8WVJ2 157 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 TCTEX1D2Q8WW35 142 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 FANCD2OSQ96PS1 177 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 OR2A7Q96R45 310 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 SRD5A3Q9H8P0 318 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 SLC2A9Q9NRM0 540 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 TECRQ9NZ01 308 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 SELENOKQ9Y6D0 94 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 S4R3C0 116 aa10.08□□□□□ -0.8
POLR2J3-219ENST00000608621 A0A1B0GW64 132 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 NPIPB5A8MRT5 1133 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 KBTBD11O94819 623 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 GALP22466 123 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 CBLN1P23435 193 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 MAS1LP35410 378 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 EIF4EBP1Q13541 118 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 CLEC19AQ6UXS0 136 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 SSX9Q7RTT3 188 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 GPHB5Q86YW7 130 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 VSTM2AQ8TAG5 236 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 WDR89Q96FK6 387 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 HSD17B10Q99714 261 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 ZC4H2Q9NQZ6 224 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 BLOC1S6Q9UL45 172 aa10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 EPPK1P58107 5090 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-219ENST00000608621 TMEM235A6NFC5 223 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 SSX5O60225 188 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 JTBO76095 146 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 CRYGCP07315 174 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 ZNF735P0CB33 412 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 ARL3P36405 182 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 GNG2P59768 71 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 IZUMO2Q6UXV1 221 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 ZNF66Q6ZN08 573 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 CACNG8Q8WXS5 425 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 GPHA2Q96T91 129 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 TXNL4BQ9NX01 149 aaKnown RBP10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 TAS2R8Q9NYW2 309 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 ANXA10Q9UJ72 324 aa10.06□□□□□ -0.8
POLR2J3-219ENST00000608621 ZNF320A2RRD8 509 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 HRASP01112 189 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 MYOD1P15172 320 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 AREGP15514 252 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 PSMB6P28072 239 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 HSPA13P48723 471 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 VCX3BQ9H321 246 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 DAPK2Q9UIK4 370 aa10.05□□□□□ -0.8
POLR2J3-219ENST00000608621 CGB1A6NKQ9 187 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 TNFSF12O43508 249 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 SCGNO76038 276 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 DHFRP00374 187 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 REG1AP05451 166 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 CTRB1P17538 263 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 FGF9P31371 208 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 RPL8P62917 257 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 SLC16A13Q7RTY0 426 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 TPRA1Q86W33 373 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 UXS1Q8NBZ7 420 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 SECTM1Q8WVN6 248 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 EEF1AKMT3Q96AZ1 226 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 MLXQ9UH92 298 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 RRP15Q9Y3B9 282 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-219ENST00000608621 TMEM213A2RRL7 107 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 CLEC3BP05452 202 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 PTHLHP12272 177 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 DEFA4P12838 97 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 HIST1H1BP16401 226 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 FCGR2CP31995 323 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 UBE2UQ5VVX9 321 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 GVQW1Q8N7I0 195 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 OR52B4Q8NGK2 314 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 LGALS14Q8TCE9 139 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 BIRC6Q9NR09 4857 aa10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 PLECQ15149 4684 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-219ENST00000608621 IGLV11-55A0A075B6I3 123 aa10.02□□□□□ -0.81
POLR2J3-219ENST00000608621 TRAV18A0A075B6X5 111 aa10.02□□□□□ -0.81
POLR2J3-219ENST00000608621 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms