RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 OR13C8Q8NGS7 320 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 LHFPL5Q8TAF8 219 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 CFAP53Q96M91 514 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 DHRS9Q9BPW9 319 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 NAA38Q9BRA0 125 aaKnown RBP0.34□□□□□ -2.36
SNORA28-201ENST00000606769 DCUN1D5Q9BTE7 237 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 MAP1LC3AQ9H492 121 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 CXorf21Q9HAI6 301 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 HES4Q9HCC6 221 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 ZNHIT6Q9NWK9 470 aaKnown RBP0.34□□□□□ -2.36
SNORA28-201ENST00000606769 DOK5Q9P104 306 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 BAZ2BQ9UIF8 2168 aaKnown RBP0.34□□□□□ -2.36
SNORA28-201ENST00000606769 DKKL1Q9UK85 242 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 PRELID1Q9Y255 219 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 ANGPT4Q9Y264 503 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 MUC16Q8WXI7 14507 aa0.34□□□□□ -2.36
SNORA28-201ENST00000606769 FLT4P35916 1363 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 PIK3R4Q99570 1358 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 IGKV1D-43A0A0B4J1Z2 117 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 TMEM269A0A1B0GVZ9 245 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 IGKV2-29A2NJV5 120 aaPredicted RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 OR51F1A6NGY5 319 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 INMT-MINDY4F8WBC2 141 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 H7C2G1 150 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 LEPROTO15243 131 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 PPBPP02775 128 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 ANGP03950 147 aaKnown RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 IL3P08700 152 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 KRT7P08729 469 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 FAM228BP0C875 321 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 OCMP0CE72 109 aaPredicted RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 CD40LGP29965 261 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 MAGEA2P43356 314 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 MAGEA12P43365 314 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 MAP2K4P45985 399 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 MAP3K7CLP57077 242 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 FXYD7P58549 80 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 TAS2R20P59543 309 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 TMEM258P61165 79 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 RPL30P62888 115 aaKnown RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 GNA12Q03113 381 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 PRB3Q04118 309 aaPredicted RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 GLO1Q04760 184 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 KISS1Q15726 138 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 NNATQ16517 81 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 ARHGAP11BQ3KRB8 267 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 CST9Q5W186 159 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 FAM173BQ6P4H8 233 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 C7orf65Q6ZTY9 151 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 FP248Q71RG6 208 aaPredicted RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 SSX8Q7RTT4 187 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 COMMD7Q86VX2 200 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 Q8N402 240 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 OR8B12Q8NGG6 310 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 OR2T4Q8NH00 348 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 C12orf43Q96C57 262 aaKnown RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 ERMAPQ96PL5 475 aaPredicted RBP0.33□□□□□ -2.36
SNORA28-201ENST00000606769 XPNPEP1Q9NQW7 623 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 TP73-AS1Q9UF72 201 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 TIMM22Q9Y584 194 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 LHFPL6Q9Y693 200 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 PXMP4Q9Y6I8 212 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 COL4A5P29400 1685 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 RTTNQ86VV8 2226 aa0.33□□□□□ -2.36
SNORA28-201ENST00000606769 GREB1Q4ZG55 1949 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 TONSLQ96HA7 1378 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 MYH11P35749 1972 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 FREM1Q5H8C1 2179 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 NUP160Q12769 1436 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 TRAV38-1A0A0B4J264 116 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 C1orf232A0A0U1RR37 186 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 OR4C45A6NMZ5 311 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 HMSDA8MTL9 139 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 KLRC4O43908 158 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 SERPINA7P05543 415 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 RNASE3P12724 160 aaKnown RBP0.32□□□□□ -2.36
SNORA28-201ENST00000606769 HLA-DMBP28068 263 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 DDTP30046 118 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 RPL12P30050 165 aaKnown RBP0.32□□□□□ -2.36
SNORA28-201ENST00000606769 SLCO1A2P46721 670 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 BLVRAP53004 296 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 MED21Q13503 144 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 RSU1Q15404 277 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 GUK1Q16774 197 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 CDKL4Q5MAI5 379 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 C1orf195Q5TG92 126 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 FAM78BQ5VT40 261 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 TMEM42Q69YG0 159 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 TNFAIP8L2Q6P589 184 aaPredicted RBP0.32□□□□□ -2.36
SNORA28-201ENST00000606769 SLC36A1Q7Z2H8 476 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 SLC22A24Q8N4F4 322 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 RPP25LQ8N5L8 163 aaKnown RBP0.32□□□□□ -2.36
SNORA28-201ENST00000606769 DEFB125Q8N687 156 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 OR1M1Q8NGA1 313 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 C10orf105Q8TEF2 133 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 KLK6Q92876 244 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 CMTM5Q96DZ9 223 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 CHST6Q9GZX3 395 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 GPR84Q9NQS5 396 aa0.32□□□□□ -2.36
SNORA28-201ENST00000606769 CISHQ9NSE2 258 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms