RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 IDO2Q6ZQW0 420 aa18.36■□□□□ 0.53
SSX2IP-209ENST00000603677 TTC9CQ8N5M4 171 aa18.36■□□□□ 0.53
SSX2IP-209ENST00000603677 OR5T1Q8NG75 326 aa18.36■□□□□ 0.53
SSX2IP-209ENST00000603677 MS4A10Q96PG2 267 aa18.36■□□□□ 0.53
SSX2IP-209ENST00000603677 OVOL1O14753 267 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 MPPED1O15442 326 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 PMP2P02689 132 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 ZP3P21754 424 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 HRH1P35367 487 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 MRPS10P82664 201 aaKnown RBP18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 OR2B11Q5JQS5 317 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 VAX1Q5SQQ9 334 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 ADAD2Q8NCV1 583 aaKnown RBP18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 COMMD9Q9P000 198 aa18.35■□□□□ 0.53
SSX2IP-209ENST00000603677 FAM223BA6NKX1 122 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 UCP3P55916 312 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 KRTAP10-11P60412 298 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 TSPAN5P62079 268 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 TMEM17Q86X19 198 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 SNX29P2Q8IUI4 249 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 FAM223AQ8IWN6 122 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 OR5B12Q96R08 314 aa18.34■□□□□ 0.53
SSX2IP-209ENST00000603677 GPR31O00270 319 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 TNFSF12O43508 249 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 PRB2P02812 416 aaPredicted RBP18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 FCER2P06734 321 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 F2RP25116 425 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 HOXD3P31249 432 aaPredicted RBP18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 RPL8P62917 257 aaKnown RBP18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 SSBP1Q04837 148 aaKnown RBP18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 AADACL3Q5VUY0 350 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 DCUN1D4Q92564 292 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 SRSF8Q9BRL6 282 aaKnown RBP18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 COA4Q9NYJ1 87 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 EXTL2Q9UBQ6 330 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 ZNF257Q9Y2Q1 563 aa18.33■□□□□ 0.52
SSX2IP-209ENST00000603677 TRBV9A0A0B4J1U6 114 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 NPIPB5A8MRT5 1133 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 PGLYRP1O75594 196 aaPredicted RBP18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 DHFRP00374 187 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 HLA-DMAP28067 261 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 RPL27AP46776 148 aaKnown RBP18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 THOC7Q6I9Y2 204 aaKnown RBP18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 ZNF343Q6P1L6 599 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 CLVS1Q8IUQ0 354 aaPredicted RBP18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 CASTOR1Q8WTX7 329 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 SLC2A9Q9NRM0 540 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 CCDC59Q9P031 241 aaKnown RBP18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 SCOCQ9UIL1 159 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 DNAH3Q8TD57 4116 aa18.32■□□□□ 0.52
SSX2IP-209ENST00000603677 NOL3O60936 208 aaKnown RBP18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 IL6RP08887 468 aaPredicted RBP18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 ZNF735P0CB33 412 aa18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 KLK9Q2XQG4 91 aa18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 ARRDC1Q8N5I2 433 aa18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 MTFP1Q9UDX5 166 aa18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 KLK9Q9UKQ9 250 aa18.31■□□□□ 0.52
SSX2IP-209ENST00000603677 IGHV4OR15-8A0A075B7B6 117 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 A0A087WW49 117 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 K7EIL1 84 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 IGHV3-11P01762 117 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 HLA-GP17693 338 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 OR4A47Q6IF82 309 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 SLC38A6Q8IZM9 456 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 VKORC1L1Q8N0U8 176 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 NECAP1Q8NC96 275 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 FCAMRQ8WWV6 532 aa18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 DLX4Q92988 240 aaPredicted RBP18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 DGCR14Q96DF8 476 aaKnown RBP18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 ZNF486Q96H40 463 aaPredicted RBP18.3■□□□□ 0.52
SSX2IP-209ENST00000603677 IFNA6P05013 189 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 CRYGCP07315 174 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 ERVK-16P61578 105 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 TATDN3Q17R31 274 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 ACSM6Q6P461 480 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 HSD17B13Q7Z5P4 300 aaPredicted RBP18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 OR51H1Q8NH63 302 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 RSRP1Q9BUV0 290 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 ELOVL1Q9BW60 279 aa18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 ALX4Q9H161 411 aaPredicted RBP18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 PEF1Q9UBV8 284 aaKnown RBP18.29■□□□□ 0.52
SSX2IP-209ENST00000603677 DPPA5A6NC42 116 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 TEX22C9J3V5 150 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 GABARAPH6UMI1 98 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 RGS5O15539 181 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 HIST1H1BP16401 226 aaKnown RBP18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 SPCS2Q15005 226 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 DYNC2LI1Q8TCX1 351 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 GPHA2Q96T91 129 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 FXYD6Q9H0Q3 95 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 HRASLSQ9HDD0 168 aa18.28■□□□□ 0.52
SSX2IP-209ENST00000603677 UPK2O00526 184 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 PTBP1P26599 531 aaKnown RBP eCLIP18.27■□□□□ 0.525e-7■■■□□ 17.8
SSX2IP-209ENST00000603677 SLURP1P55000 103 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 RNASE10Q5GAN6 216 aaKnown RBP18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 SSX9Q7RTT3 188 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 DMBX1Q8NFW5 382 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 ABHD1Q96SE0 405 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 COMMD5Q9GZQ3 224 aa18.27■□□□□ 0.52
SSX2IP-209ENST00000603677 SORL1Q92673 2214 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms