RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 PUSL1Q8N0Z8 303 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 ADAD2Q8NCV1 583 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 OR51H1Q8NH63 302 aa16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 TMEM167AQ8TBQ9 72 aa16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 DLX4Q92988 240 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 SCOCQ9UIL1 159 aa16.89■□□□□ 0.29
PPFIA3-208ENST00000602726 RCVRNP35243 200 aa16.88■□□□□ 0.29
PPFIA3-208ENST00000602726 INSL3P51460 131 aa16.88■□□□□ 0.29
PPFIA3-208ENST00000602726 C10orf55Q5SWW7 151 aa16.88■□□□□ 0.29
PPFIA3-208ENST00000602726 RANGRFQ9HD47 186 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-208ENST00000602726 ADAM30Q9UKF2 790 aa16.88■□□□□ 0.29
PPFIA3-208ENST00000602726 MAS1LP35410 378 aa16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 ECI1P42126 302 aa16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 TSPAN5P62079 268 aa16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 CLVS1Q8IUQ0 354 aaPredicted RBP16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 CD300LFQ8TDQ1 290 aa16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 USMG5Q96IX5 58 aa16.87■□□□□ 0.29
PPFIA3-208ENST00000602726 ANKRD34BA5PLL1 514 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 HPRT1P00492 218 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 RPL27AP46776 148 aaKnown RBP16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 TAS2R31P59538 309 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 DEFA5Q01523 94 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 ZNF429Q86V71 674 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 SLC25A42Q86VD7 318 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 CMTM1Q8IZ96 169 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 OR4A5Q8NH83 315 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 FYTTD1Q96QD9 318 aaKnown RBP16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 HRASLSQ9HDD0 168 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 EXTL2Q9UBQ6 330 aa16.86■□□□□ 0.29
PPFIA3-208ENST00000602726 SAP30O75446 220 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 NQO2P16083 231 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 ZP3P21754 424 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 RPL8P62917 257 aaKnown RBP16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 SPCS2Q15005 226 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 OR4A47Q6IF82 309 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 TTC9CQ8N5M4 171 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 FXYD6Q9H0Q3 95 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 BET1LQ9NYM9 111 aa16.85■□□□□ 0.29
PPFIA3-208ENST00000602726 DPPA5A6NC42 116 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 HMX3A6NHT5 357 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 GPR31O00270 319 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 PGLYRP1O75594 196 aaPredicted RBP16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 PRH1P02810 166 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 RLN1P04808 185 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 RHOGP84095 191 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 DCTN2Q13561 401 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 RNASE12Q5GAN4 147 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 RAB2BQ8WUD1 216 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 PLEKHA2Q9HB19 425 aa16.84■□□□□ 0.29
PPFIA3-208ENST00000602726 TEX22C9J3V5 150 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 RGS5O15539 181 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 S1PR2O95136 353 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 IL6RP08887 468 aaPredicted RBP16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 HLA-GP17693 338 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 LPCAT3Q6P1A2 487 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 ZNF343Q6P1L6 599 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 DMBX1Q8NFW5 382 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 C15orf40Q8WUR7 153 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 PRR25Q96S07 402 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 AKIP1Q9NQ31 210 aa16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 PEF1Q9UBV8 284 aaKnown RBP16.83■□□□□ 0.28
PPFIA3-208ENST00000602726 SORL1Q92673 2214 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 FAM223BA6NKX1 122 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 TPPPO94811 219 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 ZNF735P0CB33 412 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 F2RP25116 425 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 S100GP29377 79 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 TMBIM6P55061 237 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 ATP5G2Q06055 141 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 POU2AF1Q16633 256 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 ACSM6Q6P461 480 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 FAM223AQ8IWN6 122 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 SLC2A9Q9NRM0 540 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 COMMD9Q9P000 198 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 ZNF256Q9Y2P7 627 aaPredicted RBP16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 ZNF257Q9Y2Q1 563 aa16.82■□□□□ 0.28
PPFIA3-208ENST00000602726 TRBV9A0A0B4J1U6 114 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 E7EUB6 86 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 RBMXL2O75526 392 aaKnown RBP16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 RPL5P46777 297 aaKnown RBP16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 ERVK-16P61578 105 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 ZNF45Q02386 682 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 VAX1Q5SQQ9 334 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 NECAP1Q8NC96 275 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 OR52I2Q8NH67 350 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 DGCR14Q96DF8 476 aaKnown RBP16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 OR4C12Q96R67 309 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 BCL7BQ9BQE9 202 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 ELOVL1Q9BW60 279 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 TMEM140Q9NV12 185 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 KLK11Q9UBX7 282 aa16.81■□□□□ 0.28
PPFIA3-208ENST00000602726 NPIPB5A8MRT5 1133 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 M0QYG6 137 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 UPK2O00526 184 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 NOL3O60936 208 aaKnown RBP16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 LY86O95711 162 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 IFNA6P05013 189 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 MYOD1P15172 320 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 RPA2P15927 270 aa16.8■□□□□ 0.28
PPFIA3-208ENST00000602726 PHLDA2Q53GA4 152 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms