RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 RBFOX2O43251 390 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 ACSF3Q4G176 576 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 C1orf210Q8IVY1 113 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 DYNLRB2Q8TF09 96 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 PGPEP1LA6NFU8 196 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 C19orf67A6NJJ6 358 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 CEACAM1P13688 526 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 ADMP35318 185 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 C5orf30Q96GV9 206 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 WDR87Q6ZQQ6 2873 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 PKIBQ9C010 78 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 YBX2Q9Y2T7 364 aaKnown RBP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 MSGN1A6NI15 193 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 C1QAP02745 245 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM211Q6ICI0 200 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 PLSCR4Q9NRQ2 329 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 SEMA5BQ9P283 1151 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 OTOGLQ3ZCN5 2332 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 MEF2CQ06413 473 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 C9orf40Q8IXQ3 194 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 HIGD1AQ9Y241 93 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 PSG6Q00889 435 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 TFF2Q03403 129 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 OR1L8Q8NGR8 309 aa7.5□□□□□ -1.21
CSMD1-216ENST00000602557 RCC1LQ96I51 464 aaKnown RBP7.5□□□□□ -1.21
CSMD1-216ENST00000602557 SRP19P09132 144 aaKnown RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 CLEC2AQ6UVW9 174 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 LINC00596Q86U02 117 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 P2RX4Q99571 388 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV9-2A0A087WT02 112 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SYNGR1O43759 233 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 LAIR2Q6ISS4 152 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 MDP1Q86V88 176 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SPINT1O43278 529 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 NPSP0C0P6 89 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 LINC00869P0C866 280 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 EAF1Q96JC9 268 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 COX11Q9Y6N1 276 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 WDYHV1Q96HA8 205 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 PSMG3Q9BT73 122 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 GPR179Q6PRD1 2367 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 RRHO14718 337 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 TAF15Q92804 592 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SLC25A40Q8TBP6 338 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 RSPO3Q9BXY4 272 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 BGLAPP02818 100 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 ICAM4Q14773 271 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 PRDM13Q9H4Q3 707 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SLC25A10Q9UBX3 287 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 DTX4Q9Y2E6 619 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 INSIG2Q9Y5U4 225 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 LIFP15018 202 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 CRYBB3P26998 211 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 TEPPQ6URK8 271 aa7.49□□□□□ -1.21
CSMD1-216ENST00000602557 SF3B5Q9BWJ5 86 aaKnown RBP7.49□□□□□ -1.21
CSMD1-216ENST00000602557 MALRD1Q5VYJ5 2156 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 ASAH2BP0C7U1 165 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 GZMMP51124 257 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 LILRA6Q6PI73 481 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TSC2P49815 1807 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 LOXL3P58215 753 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 ZNF488Q96MN9 340 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 DENND4AQ7Z401 1863 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 CSPG4Q6UVK1 2322 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 K7N7A8 449 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TDGF1P3P51864 188 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 FAM181AQ8N9Y4 354 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
CSMD1-216ENST00000602557 A0A1W2PP11 408 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 J3QT63 122 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TNFSF14O43557 240 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 COX5BP10606 129 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM155Q4W5P6 130 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 SPRED2Q7Z698 418 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 ZNF764Q96H86 408 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TIMP4Q99727 224 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM222Q9H0R3 208 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 IGHV5-10-1A0A0J9YXX1 117 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM50AO95807 157 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 HIST1H1AQ02539 215 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV5A0A0B4J249 113 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 SPINK8P0C7L1 97 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 CCL4P13236 92 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 RPL31P62899 125 aaKnown RBP7.48□□□□□ -1.21
CSMD1-216ENST00000602557 C1RLQ9NZP8 487 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 RNF7Q9UBF6 113 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 MUC21A0A0G2JKD1 596 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 MUC21A0A140T8X8 626 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 A0A1W2PQD3 144 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms