RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 METTL9Q9H1A3 318 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ZNF286AQ9HBT8 521 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 HES4Q9HCC6 221 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ZNF256Q9Y2P7 627 aaPredicted RBP4.11□□□□□ -1.75
VRK3-226ENST00000602029 KCNIP3Q9Y2W7 256 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SMAD5-AS1Q9Y6J3 95 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ALMS1Q8TCU4 4167 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 A0A1W2PPE3 182 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 MEIS3P1A6NDR6 274 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 OOSP1A8MZH6 123 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 AP4M1O00189 453 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 SAP30O75446 220 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 SPDEFO95238 335 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 CSTBP04080 98 aaKnown RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 RPLP1P05386 114 aaKnown RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 GNB3P16520 340 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 VAMP1P23763 118 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 IL3RAP26951 378 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 BLVRBP30043 206 aaPredicted RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 REG1BP48304 166 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 RAB5CP51148 216 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 TMEM50BP56557 158 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ERVK11-1P61568 191 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 BLOC1S1P78537 153 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 UBE2V2Q15819 145 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 PLAC9Q5JTB6 97 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 C10orf91Q5T1B1 145 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 AADACL3Q5VUY0 350 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 DHRS11Q6UWP2 260 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 HEPN1Q6WQI6 88 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ETV3LQ6ZN32 361 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 SVBPQ8N300 66 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ZNF565Q8N9K5 539 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 CCDC71LQ8N9Z2 235 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 OR9G1Q8NH87 305 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 RFESDQ8TAC1 157 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 MARCH1Q8TCQ1 289 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 MRGPRDQ8TDS7 321 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ABHD5Q8WTS1 349 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 NUDCD2Q8WVJ2 157 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 MARC2Q969Z3 335 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 RBMXL1Q96E39 390 aaKnown RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 RAX2Q96IS3 184 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ARHGAP5-AS1Q96IT6 56 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ZNF471Q9BX82 626 aaPredicted RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 PECRQ9BY49 303 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 SEC11CQ9BY50 192 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 RIMS4Q9H426 269 aaPredicted RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 C5orf66Q9H5L9 145 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 SPACA1Q9HBV2 294 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 TAS2R3Q9NYW6 316 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 CALYQ9NYX4 217 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 OR6C3Q9NZP0 311 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 MBD2Q9UBB5 411 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 ANXA10Q9UJ72 324 aa4.1□□□□□ -1.75
VRK3-226ENST00000602029 CARHSP1Q9Y2V2 147 aaKnown RBP4.1□□□□□ -1.75
VRK3-226ENST00000602029 IGKV1-27A0A075B6S5 117 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 A0A0A6YYD4 124 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 TRAV39A0A0B4J263 110 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 IGKV1-9A0A0C4DH69 117 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 KBTBD11-OT1A0A1B0GTJ5 212 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 C5orf51A6NDU8 294 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CRYM-AS1A6NIL9 109 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 ZNF729A6NN14 1252 aaPredicted RBP4.09□□□□□ -1.75
VRK3-226ENST00000602029 E5RGE8 158 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 HSD17B6O14756 317 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SOCS1O15524 211 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SNAPINO95295 136 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SIX6O95475 246 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CDS2O95674 445 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CTXN2P0C2S0 81 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 H2AFB1P0C5Y9 115 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 AKR1C4P17516 323 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CTRB1P17538 263 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 RAB7AP51149 207 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 F2RL1P55085 397 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 RND3P61587 244 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SUPT4H1P63272 117 aaKnown RBP4.09□□□□□ -1.75
VRK3-226ENST00000602029 PDZK1IP1Q13113 114 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 IL15RAQ13261 267 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 IL13RA2Q14627 380 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 MPV17LQ2QL34 196 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CASC10Q5T4H9 136 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CTRB2Q6GPI1 263 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 OR10K2Q6IF99 312 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 FAM122CQ6P4D5 195 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 KCTD9Q7L273 389 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SLC38A6Q8IZM9 456 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 GVQW1Q8N7I0 195 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 C5orf56Q8N8D9 126 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 UBAC2Q8NBM4 344 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 TMEM104Q8NE00 496 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 OR11H1Q8NG94 326 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 DCUN1D4Q92564 292 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 TMEM230Q96A57 120 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 SMIM8Q96KF7 97 aa4.09□□□□□ -1.75
VRK3-226ENST00000602029 CXorf58Q96LI9 332 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms