RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A12PA8MX19 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A5PA8MXJ8 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A23PA8MXZ1 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 J3QR06 171 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
ZNF558-207ENST00000601372 HPRT1P00492 218 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A15PP0C7V4 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A13PP0C7W8 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A14PP0C7W9 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 FAM90A24PP0C7X0 464 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 CYB5R2Q6BCY4 276 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 SSX7Q7RTT5 188 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 SAXO1Q8IYX7 474 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 WASHC3Q9Y3C0 194 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 ACACAQ13085 2346 aa9.31□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV1D-13A0A0B4J2D9 117 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV1-13P0DP09 117 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 CRISP2P16562 243 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 EGR1P18146 543 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 UCP3P55916 312 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 GAMTQ14353 236 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 FAM216BQ8N7L0 139 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 NOL4LQ96MY1 436 aaPredicted RBP9.3□□□□□ -0.92
ZNF558-207ENST00000601372 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 CARHSP1Q9Y2V2 147 aaKnown RBP9.3□□□□□ -0.92
ZNF558-207ENST00000601372 CXorf65A6NEN9 183 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 K7EM74 188 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 TPRP12270 2363 aaKnown RBP9.3□□□□□ -0.92
ZNF558-207ENST00000601372 HELTA6NFD8 242 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 SMIM8Q96KF7 97 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV1-27A0A075B6S5 117 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 OR4X1Q8NH49 305 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 RFNGQ9Y644 331 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 FAM186AA6NE01 2351 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 RPL39P5Q59GN2 51 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 RNF24Q9Y225 148 aa9.3□□□□□ -0.92
ZNF558-207ENST00000601372 HSBP1O75506 76 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
ZNF558-207ENST00000601372 TFF3Q07654 80 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
ZNF558-207ENST00000601372 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV3D-15A0A087WSY6 115 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 CCL1P22362 96 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 UNQ5815/PRO19632Q6UWF5 114 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PDPNQ86YL7 162 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 SNURFLB1AK76 121 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 SERF2P84101 59 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PAX5Q02548 391 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 LDLRAD4O15165 306 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 B3GALT5-AS1P59052 145 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 ZNF672Q499Z4 452 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-207ENST00000601372 OR1L4Q8NGR5 311 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 EFNA4P52798 201 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 A0A1W2PRX2 142 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PLAUP00749 431 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 MC5RP33032 325 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 HLA-DRB5Q30154 266 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 ZIC4Q8N9L1 334 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 OR4F17Q8NGA8 305 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 OR9G1Q8NH87 305 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 JMJD8Q96S16 334 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 TMEM167BQ9NRX6 74 aa9.29□□□□□ -0.92
ZNF558-207ENST00000601372 PQLC2LA1A4F0 135 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 WDFY1Q8IWB7 410 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 SLC25A15Q9Y619 301 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 ZNF729A6NN14 1252 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV1-12A0A0C4DH73 117 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 F8VVB4 439 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 F8VWA3 439 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 IGKV1D-12P01611 117 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 SUPT4H1P63272 117 aaKnown RBP9.28□□□□□ -0.92
ZNF558-207ENST00000601372 MEF2BQ02080 365 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-207ENST00000601372 ZNF474Q6S9Z5 364 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-207ENST00000601372 NEUROG1Q92886 237 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 M0R2Z0 102 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 SGMS2Q8NHU3 365 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 NABP1Q96AH0 204 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
ZNF558-207ENST00000601372 TMEM140Q9NV12 185 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 TMEM131Q92545 1883 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 FREM3P0C091 2139 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 CSN3P07498 182 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 FAM209BQ5JX69 171 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 OR1L8Q8NGR8 309 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 PLPPR1Q8TBJ4 325 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 VN1R17PQ8TDU5 208 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 SRD5A3Q9H8P0 318 aa9.28□□□□□ -0.92
ZNF558-207ENST00000601372 IGHV3-48P01763 117 aa9.27□□□□□ -0.92
ZNF558-207ENST00000601372 REG1AP05451 166 aa9.27□□□□□ -0.92
ZNF558-207ENST00000601372 PAX6P26367 422 aa9.27□□□□□ -0.92
ZNF558-207ENST00000601372 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms