RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 S100A16Q96FQ6 103 aaKnown RBP17.27■□□□□ 0.36
SSBP4-209ENST00000601357 SIGLEC8Q9NYZ4 499 aa17.27■□□□□ 0.36
SSBP4-209ENST00000601357 HMX3A6NHT5 357 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 TNFSF12O43508 249 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 TNFAIP8O95379 198 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 HRASP01112 189 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 FCER2P06734 321 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 ZNF735P0CB33 412 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 ATP5G2Q06055 141 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 EXOSC2Q13868 293 aaKnown RBP17.26■□□□□ 0.35
SSBP4-209ENST00000601357 RPEL1Q2QD12 228 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 SLC25A42Q86VD7 318 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 ANAPC10Q9UM13 185 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 ZNF257Q9Y2Q1 563 aa17.26■□□□□ 0.35
SSBP4-209ENST00000601357 RYR3Q15413 4870 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 NBEAL2Q6ZNJ1 2754 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.25■□□□□ 0.35
SSBP4-209ENST00000601357 MEIS3P1A6NDR6 274 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 NPIPB5A8MRT5 1133 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 BMPR1BO00238 502 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 RBFOX2O43251 390 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■■■■□ 22.9
SSBP4-209ENST00000601357 CSN3P07498 182 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 RPL27AP46776 148 aaKnown RBP17.25■□□□□ 0.35
SSBP4-209ENST00000601357 SLC5A7Q9GZV3 580 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 VCX3AQ9NNX9 186 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 SLC2A9Q9NRM0 540 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 BET1LQ9NYM9 111 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 DMRT1Q9Y5R6 373 aa17.25■□□□□ 0.35
SSBP4-209ENST00000601357 LSM3P62310 102 aaKnown RBP17.24■□□□□ 0.35
SSBP4-209ENST00000601357 TATDN3Q17R31 274 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 KLK9Q2XQG4 91 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 ZNF818PQ6ZRF7 136 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 SPAG16Q8N0X2 631 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 SAMD12Q8N8I0 201 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 KLK9Q9UKQ9 250 aa17.24■□□□□ 0.35
SSBP4-209ENST00000601357 CGB1A6NKQ9 187 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 A8MZ25 164 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 SULT1C2O00338 296 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 CRYGCP07315 174 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 TAS2R20P59543 309 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 FXYD4P59646 89 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 RPL8P62917 257 aaKnown RBP17.23■□□□□ 0.35
SSBP4-209ENST00000601357 POU2AF1Q16633 256 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 C15orf32Q32M92 178 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 OR4A47Q6IF82 309 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 DHRS11Q6UWP2 260 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 C19orf35Q6ZS72 473 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 SSX9Q7RTT3 188 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 OR4A5Q8NH83 315 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 SLC25A46Q96AG3 418 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 AIFM2Q9BRQ8 373 aa17.23■□□□□ 0.35
SSBP4-209ENST00000601357 THAP7Q9BT49 309 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-209ENST00000601357 H0Y980 276 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 OR2J3O76001 311 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 IGHV4-30-4P0DP06 118 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 AREGP15514 252 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 HLA-GP17693 338 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 NAT1P18440 290 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 MECP2P51608 486 aaKnown RBP17.22■□□□□ 0.35
SSBP4-209ENST00000601357 TAS2R31P59538 309 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 CATR1Q13166 79 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 TMEM69Q5SWH9 247 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 FANCD2OSQ96PS1 177 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 FYTTD1Q96QD9 318 aaKnown RBP17.22■□□□□ 0.35
SSBP4-209ENST00000601357 IFT46Q9NQC8 304 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 C19orf73Q9NVV2 129 aa17.22■□□□□ 0.35
SSBP4-209ENST00000601357 MYOD1P15172 320 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 GNRHRP30968 328 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 FAM209BQ5JX69 171 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 TMEM17Q86X19 198 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 KCTD12Q96CX2 325 aaKnown RBP17.21■□□□□ 0.35
SSBP4-209ENST00000601357 RCHY1Q96PM5 261 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 EHFQ9NZC4 300 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 PEMTQ9UBM1 199 aa17.21■□□□□ 0.35
SSBP4-209ENST00000601357 HPRT1P00492 218 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 FGF2P09038 288 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 CTRB1P17538 263 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 PSMB6P28072 239 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 RFX2P48378 723 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 CTRB2Q6GPI1 263 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 ADAMTSL5Q6ZMM2 481 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 FBXL7Q9UJT9 491 aa17.2■□□□□ 0.34
SSBP4-209ENST00000601357 DNAH7Q8WXX0 4024 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 NQO2P16083 231 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 OR2B8PP59922 312 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 HERV-K104P61576 105 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 LCN12Q6JVE5 192 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 Q8N402 240 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 OR51H1Q8NH63 302 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 CD300LFQ8TDQ1 290 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 BORCS5Q969J3 196 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 MOB3AQ96BX8 217 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 TM2D3Q9BRN9 247 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 FUNDC2Q9BWH2 189 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 PLEKHA2Q9HB19 425 aa17.19■□□□□ 0.34
SSBP4-209ENST00000601357 TRAV3A0A0B4J244 114 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 IZUMO1RA6ND01 250 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 PPP5D1E7EU14 171 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 NDUFB8O95169 186 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms