RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 DEFB114Q30KQ6 69 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 SFXN4Q6P4A7 337 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-204ENST00000601038 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 LGALS14Q8TCE9 139 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 DPPA5A6NC42 116 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 PPP5D1E7EU14 171 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 E7EUB6 86 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 LGALS9O00182 355 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
SCAF1-204ENST00000601038 HRASP01112 189 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 ZNF735P0CB33 412 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 KIR2DS2P43631 304 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 CD81P60033 236 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 NEURL2Q9BR09 285 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 GAR1Q9NY12 217 aaKnown RBP12.84□□□□□ -0.35
SCAF1-204ENST00000601038 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 TAS2R8Q9NYW2 309 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 CEPT1Q9Y6K0 416 aa12.84□□□□□ -0.35
SCAF1-204ENST00000601038 A0A1B0GW64 132 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 C2orf70A6NJV1 201 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 TPPPO94811 219 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 OR2C1O95371 312 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 CRYGCP07315 174 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 FOLR2P14207 255 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 SCAND1P57086 179 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 MSMO1Q15800 293 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 FANCD2OSQ96PS1 177 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 FYTTD1Q96QD9 318 aaKnown RBP12.83□□□□□ -0.36
SCAF1-204ENST00000601038 YTHDF1Q9BYJ9 559 aaKnown RBP12.83□□□□□ -0.36
SCAF1-204ENST00000601038 TECRQ9NZ01 308 aaKnown RBP12.83□□□□□ -0.36
SCAF1-204ENST00000601038 KLK9Q9UKQ9 250 aa12.83□□□□□ -0.36
SCAF1-204ENST00000601038 DHFRP00374 187 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
SCAF1-204ENST00000601038 CD7P09564 240 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 PSMB6P28072 239 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 SDC2P34741 201 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
SCAF1-204ENST00000601038 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 AIFM2Q9BRQ8 373 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 HIPK2Q9H2X6 1198 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
SCAF1-204ENST00000601038 TRAV18A0A075B6X5 111 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 NDUFB8O95169 186 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 AREGP15514 252 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 FCGR2CP31995 323 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 ARPC4P59998 168 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 C19orf35Q6ZS72 473 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 SSX9Q7RTT3 188 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 OR4A5Q8NH83 315 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 SECTM1Q8WVN6 248 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 CCDC140Q96MF4 163 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 CCL28Q9NRJ3 127 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 BET1LQ9NYM9 111 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 ETV7Q9Y603 341 aa12.81□□□□□ -0.36
SCAF1-204ENST00000601038 A0A0A6YYH2 397 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 RBMY1BA6NDE4 496 aaKnown RBP12.8□□□□□ -0.36
SCAF1-204ENST00000601038 RBMY1EA6NEQ0 496 aaKnown RBP12.8□□□□□ -0.36
SCAF1-204ENST00000601038 A6NJ64 397 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCAF1-204ENST00000601038 IGHV3-23P01764 117 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 RBMY1DP0C7P1 496 aaKnown RBP12.8□□□□□ -0.36
SCAF1-204ENST00000601038 HIST1H1BP16401 226 aaKnown RBP12.8□□□□□ -0.36
SCAF1-204ENST00000601038 CTRB1P17538 263 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 HLA-GP17693 338 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 CBLN1P23435 193 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 ARL3P36405 182 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 MXD1Q05195 221 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 GUCA2BQ16661 112 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 CTRB2Q6GPI1 263 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 SPAG16Q8N0X2 631 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 DEFB125Q8N687 156 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 GVQW1Q8N7I0 195 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 OR13F1Q8NGS4 319 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 EEF1AKMT3Q96AZ1 226 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 SLC25A38Q96DW6 304 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 Q9H521 79 aa12.8□□□□□ -0.36
SCAF1-204ENST00000601038 DNAH7Q8WXX0 4024 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 TNFSF12O43508 249 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 PPYP01298 95 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 PTHLHP12272 177 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 EDN2P20800 178 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 IDNKQ5T6J7 187 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms