RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CHST1O43916 411 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 GPR137BO60478 399 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 S1PR2O95136 353 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 HLA-AP01891 365 aaKnown RBP9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 AMY1AP04745 511 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 VAMP1P23763 118 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 F2RL1P55085 397 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 PSG5Q15238 335 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 C5orf64Q2M2E5 130 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 C4orf46Q504U0 113 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 OR2B11Q5JQS5 317 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 FAM219AQ8IW50 185 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 SELENOHQ8IZQ5 122 aaKnown RBP9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 LGI3Q8N145 548 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 C5orf56Q8N8D9 126 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 ZNF431Q8TF32 576 aaPredicted RBP9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 LSM10Q969L4 123 aaKnown RBP9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 R3HDM4Q96D70 268 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 SEC22AQ96IW7 307 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
CHMP2A-207ENST00000600804 DNAH3Q8TD57 4116 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 C7orf66A4D0T2 115 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 CREBL2O60519 120 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 OR2A4O95047 310 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 SAA1P0DJI8 122 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 SPNP16150 400 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 VDAC1P21796 283 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 ERVK-16P61578 105 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 FOXL1Q12952 345 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 HNF4GQ14541 408 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 LY6EQ16553 131 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 TRIM16LQ309B1 348 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 ANKRD55Q3KP44 614 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 SP6Q3SY56 376 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 TMEM219Q86XT9 240 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 ZNF695Q8IW36 515 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 COQ8AQ8NI60 647 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 TMEM167AQ8TBQ9 72 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 OR2A7Q96R45 310 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 GPN1Q9HCN4 374 aaPredicted RBP9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
CHMP2A-207ENST00000600804 DBX1A6NMT0 343 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 SLC25A17O43808 307 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 SLC25A6P12236 298 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 CNTFRP26992 372 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 MAS1LP35410 378 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 RAB25P57735 213 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 SRSF4Q08170 494 aaKnown RBP9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 AARDQ4LEZ3 155 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 PPP1R27Q86WC6 154 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 Q8N2B8 174 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 PHB2Q99623 299 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 NPFFR1Q9GZQ6 430 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 TMEM140Q9NV12 185 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 COA4Q9NYJ1 87 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 METTL1Q9UBP6 276 aaKnown RBP9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 ZNF580Q9UK33 172 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 TMED3Q9Y3Q3 217 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 MMP24Q9Y5R2 645 aa9.23□□□□□ -0.93
CHMP2A-207ENST00000600804 TET2Q6N021 2002 aaPredicted RBP9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 NCBP2LA6PVI3 153 aaKnown RBP9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 UPK2O00526 184 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 TSPAN9O75954 239 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 KBTBD11O94819 623 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 KRASP01116 189 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 IGKV1-5P01602 117 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 IGHG2P01859 326 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 PRSS8Q16651 343 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 TATDN3Q17R31 274 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 MRGPRG-AS1Q2M3A8 158 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 NMSQ5H8A3 153 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 TMEM268Q5VZI3 342 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 LIN54Q6MZP7 749 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 MMD2Q8IY49 270 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 DMBX1Q8NFW5 382 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 CASTOR1Q8WTX7 329 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 RRNAD1Q96FB5 475 aaKnown RBP9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 RASL11BQ9BPW5 248 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 FBXL15Q9H469 300 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 CACFD1Q9UGQ2 172 aa9.22□□□□□ -0.93
CHMP2A-207ENST00000600804 A0A0B4J293 547 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 NDUFA7O95182 113 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 HLA-GP17693 338 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 MDKP21741 143 aaPredicted RBP9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 G6PCP35575 357 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 AKR1C2P52895 323 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 CRIP2P52943 208 aaPredicted RBP9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 RELBQ01201 579 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 H2BFWTQ7Z2G1 175 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 ZNF429Q86V71 674 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 VKORC1L1Q8N0U8 176 aa9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 C12orf45Q8N5I9 185 aaPredicted RBP9.21□□□□□ -0.94
CHMP2A-207ENST00000600804 SLC35G3Q8N808 338 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms