RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TEX22C9J3V5 150 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
VRK3-221ENST00000600284 XRCC3O43542 346 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 ZNF735P0CB33 412 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 IGHV4-30-4P0DP06 118 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 RPL27AP46776 148 aaKnown RBP12.04□□□□□ -0.48
VRK3-221ENST00000600284 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
VRK3-221ENST00000600284 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 Q8N402 240 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 OR13F1Q8NGS4 319 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 SECTM1Q8WVN6 248 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
VRK3-221ENST00000600284 S100A16Q96FQ6 103 aaKnown RBP12.04□□□□□ -0.48
VRK3-221ENST00000600284 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 BET1LQ9NYM9 111 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
VRK3-221ENST00000600284 DPPA5A6NC42 116 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 BMPR1BO00238 502 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 DHFRP00374 187 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 PRH1P02810 166 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 CRYGCP07315 174 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 IL6RP08887 468 aaPredicted RBP12.03□□□□□ -0.48
VRK3-221ENST00000600284 MECP2P51608 486 aaKnown RBP12.03□□□□□ -0.48
VRK3-221ENST00000600284 RPL8P62917 257 aaKnown RBP12.03□□□□□ -0.48
VRK3-221ENST00000600284 CATR1Q13166 79 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 LCN12Q6JVE5 192 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 BORCS5Q969J3 196 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 SLC5A7Q9GZV3 580 aa12.03□□□□□ -0.48
VRK3-221ENST00000600284 HUWE1Q7Z6Z7 4374 aaKnown RBP12.02□□□□□ -0.48
VRK3-221ENST00000600284 A0A087WXM4 84 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 HMX3A6NHT5 357 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 E7EUB6 86 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 HPRT1P00492 218 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 FGF2P09038 288 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 PTHLHP12272 177 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 TAS2R31P59538 309 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 C15orf32Q32M92 178 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 SPAG16Q8N0X2 631 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 CD300LFQ8TDQ1 290 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 VCX3AQ9NNX9 186 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
VRK3-221ENST00000600284 TNFSF12O43508 249 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 OR2J3O76001 311 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
VRK3-221ENST00000600284 HLA-GP17693 338 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 PSMB6P28072 239 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 RPS19P39019 145 aaKnown RBP12.01□□□□□ -0.49
VRK3-221ENST00000600284 POU2AF1Q16633 256 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 UBE2NLQ5JXB2 153 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 DHRS11Q6UWP2 260 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 GTSCR1Q86UQ5 136 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 YIPF6Q96EC8 236 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
VRK3-221ENST00000600284 GPHA2Q96T91 129 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 THAP7Q9BT49 309 aaPredicted RBP12.01□□□□□ -0.49
VRK3-221ENST00000600284 FBXL7Q9UJT9 491 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 DMRT1Q9Y5R6 373 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
VRK3-221ENST00000600284 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
VRK3-221ENST00000600284 A0A1B0GW64 132 aa12□□□□□ -0.49
VRK3-221ENST00000600284 LGALS9O00182 355 aa12□□□□□ -0.49
VRK3-221ENST00000600284 GGCTO75223 188 aaKnown RBP12□□□□□ -0.49
VRK3-221ENST00000600284 TNFAIP8O95379 198 aa12□□□□□ -0.49
VRK3-221ENST00000600284 NQO2P16083 231 aa12□□□□□ -0.49
VRK3-221ENST00000600284 CTRB1P17538 263 aa12□□□□□ -0.49
VRK3-221ENST00000600284 FXYD4P59646 89 aa12□□□□□ -0.49
VRK3-221ENST00000600284 CTRB2Q6GPI1 263 aa12□□□□□ -0.49
VRK3-221ENST00000600284 ZNF818PQ6ZRF7 136 aa12□□□□□ -0.49
VRK3-221ENST00000600284 LAX1Q8IWV1 398 aa12□□□□□ -0.49
VRK3-221ENST00000600284 TSPAN14Q8NG11 270 aa12□□□□□ -0.49
VRK3-221ENST00000600284 MUC7Q8TAX7 377 aa12□□□□□ -0.49
VRK3-221ENST00000600284 FANCD2OSQ96PS1 177 aa12□□□□□ -0.49
VRK3-221ENST00000600284 SRSF8Q9BRL6 282 aaKnown RBP12□□□□□ -0.49
VRK3-221ENST00000600284 PLEKHA2Q9HB19 425 aa12□□□□□ -0.49
VRK3-221ENST00000600284 IFT46Q9NQC8 304 aa12□□□□□ -0.49
VRK3-221ENST00000600284 ANAPC10Q9UM13 185 aa12□□□□□ -0.49
VRK3-221ENST00000600284 RYR3Q15413 4870 aa12□□□□□ -0.49
VRK3-221ENST00000600284 SULT1C2O00338 296 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 NAT1P18440 290 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 HERV-K104P61576 105 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 HRASLSQ9HDD0 168 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 DNAH7Q8WXX0 4024 aa11.99□□□□□ -0.49
VRK3-221ENST00000600284 UPK2O00526 184 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 FCER2P06734 321 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 DEFA4P12838 97 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 AREGP15514 252 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 GNRHRP30968 328 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 TGFBR1P36897 503 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 TAS2R46P59540 309 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 TAS2R20P59543 309 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 OR2B8PP59922 312 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 TMEM69Q5SWH9 247 aa11.98□□□□□ -0.49
VRK3-221ENST00000600284 CADM3Q8N126 398 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms