RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 F2RP25116 425 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 REG1BP48304 166 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 UBE2MP61081 183 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 RPL23AP62750 156 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 SUPT4H1P63272 117 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM128Q5BJH2 165 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 TBC1D26Q86UD7 250 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 CCDC71LQ8N9Z2 235 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 DRAXINQ8NBI3 349 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 MINDY2Q8NBR6 621 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 FAM212BQ9NTI7 297 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-218ENST00000598907 FAM90A9PA6NNJ1 464 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 RLN1P04808 185 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 ANXA7P20073 488 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 S100GP29377 79 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 MYCNOSP40205 109 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 DYNLT3P51808 116 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 TAS2R31P59538 309 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 TAGLNQ01995 201 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 C9orf152Q5JTZ5 239 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 CCDC144NLQ6NUI1 221 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 ZNF329Q86UD4 541 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 TCTEX1D1Q8N7M0 179 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 GALNT14Q96FL9 552 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 P2RX4Q99571 388 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
SHKBP1-218ENST00000598907 KIAA1109Q2LD37 5005 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 C3orf85A0A1B0GTC6 90 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 PSMB11A5LHX3 300 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 INMT-MINDY4F8WBC2 141 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 H0YJW9 148 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 B3GALNT1O75752 331 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 IL5P05113 134 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 SNRNP70P08621 437 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 OR4E1P0C645 316 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 AKR1C4P17516 323 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 CD1BP29016 333 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 MC5RP33032 325 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 CATR1Q13166 79 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 EBI3Q14213 229 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 ZNF585BQ52M93 769 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 GLDNQ6ZMI3 551 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 EDA2RQ9HAV5 297 aa10.87□□□□□ -0.67
SHKBP1-218ENST00000598907 TEX13DA0A0J9YY54 714 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 SEC14L6B5MCN3 397 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 H0Y980 276 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 RBFOX2O43251 390 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 SFT2D2O95562 160 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 CD24P25063 80 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 UCP1P25874 307 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 KIR2DS2P43631 304 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 PPP1R1AQ13522 171 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 MOB3BQ86TA1 216 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 THNSL2Q86YJ6 484 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 OR51H1Q8NH63 302 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 GLYATL2Q8WU03 294 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 TCTEX1D2Q8WW35 142 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 PRELID3BQ9Y3B1 194 aa10.86□□□□□ -0.67
SHKBP1-218ENST00000598907 C9orf170A2RU37 121 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 PRAF2O60831 178 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 RRASP10301 218 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 BRS3P32247 399 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 DHRS2Q13268 280 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM187Q14656 261 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 PDPNQ86YL7 162 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 SPAG16Q8N0X2 631 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 CD300LFQ8TDQ1 290 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 RAX2Q96IS3 184 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM222Q9H0R3 208 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 SLC35D1Q9NTN3 355 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 KCNIP3Q9Y2W7 256 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 WASHC3Q9Y3C0 194 aa10.85□□□□□ -0.67
SHKBP1-218ENST00000598907 IGHV3-72A0A0B4J1Y9 119 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 A0A0B4J293 547 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 FCGR3BO75015 233 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 CDS2O95674 445 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 DHFRP00374 187 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 APOA2P02652 100 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 ARHGDIBP52566 201 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 SP6Q3SY56 376 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 Q8N6K4 173 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM56Q96MV1 263 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 RNF5Q99942 180 aa10.84□□□□□ -0.67
SHKBP1-218ENST00000598907 TMEM56-RWDD3S4R434 201 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms