RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 RABL2AQ9UBK7 228 aaPredicted RBP10.77□□□□□ -0.69
UPF1-205ENST00000598209 RABL2BQ9UNT1 228 aa10.77□□□□□ -0.69
UPF1-205ENST00000598209 I3L521 148 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 CTDSPLO15194 276 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 HPRT1P00492 218 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 APELAP0DMC3 54 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 TNFSF8P32971 234 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 UCP3P55916 312 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 RAB25P57735 213 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 TPPP2P59282 170 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 TAS2R19P59542 299 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
UPF1-205ENST00000598209 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 TMEM167AQ8TBQ9 72 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 RCC1LQ96I51 464 aaKnown RBP10.76□□□□□ -0.69
UPF1-205ENST00000598209 AIFM2Q9BRQ8 373 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 RSRP1Q9BUV0 290 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
UPF1-205ENST00000598209 H3BUA1 57 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
UPF1-205ENST00000598209 MPPED1O15442 326 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 S1PR2O95136 353 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 RAB3DO95716 219 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 TRGV3P03979 118 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 CD74P04233 296 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 NQO2P16083 231 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 F2RP25116 425 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 S100GP29377 79 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 TAS2R31P59538 309 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 RUNX1Q01196 453 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 KPRPQ5T749 579 aaPredicted RBP10.75□□□□□ -0.69
UPF1-205ENST00000598209 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 STEAP1BQ6NZ63 245 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 SLC38A6Q8IZM9 456 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 ARRDC1Q8N5I2 433 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 OR11H1Q8NG94 326 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 OR4D10Q8NGI6 311 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 DGCR14Q96DF8 476 aaKnown RBP10.75□□□□□ -0.69
UPF1-205ENST00000598209 SPIN2AQ99865 258 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 SPIN2BQ9BPZ2 258 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 PLEKHA2Q9HB19 425 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
UPF1-205ENST00000598209 FABP12A6NFH5 140 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 DUS4LO95620 317 aaKnown RBP10.74□□□□□ -0.69
UPF1-205ENST00000598209 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 PGAM2P15259 253 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 MAS1LP35410 378 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 LPAR6P43657 344 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
UPF1-205ENST00000598209 FHL3Q13643 280 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 POU2AF1Q16633 256 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 LHFPL1Q86WI0 220 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 DMBX1Q8NFW5 382 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 OR4A5Q8NH83 315 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 SOSTQ9BQB4 213 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 ALX4Q9H161 411 aaPredicted RBP10.74□□□□□ -0.69
UPF1-205ENST00000598209 HRASLSQ9HDD0 168 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 COA4Q9NYJ1 87 aa10.74□□□□□ -0.69
UPF1-205ENST00000598209 LGALS1P09382 135 aaKnown RBP10.73□□□□□ -0.69
UPF1-205ENST00000598209 OR9G9P0C7N8 305 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
UPF1-205ENST00000598209 PPP5CP53041 499 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 ERVK-16P61578 105 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 ZNF616Q08AN1 781 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 ZNF585BQ52M93 769 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 TBC1D26Q86UD7 250 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
UPF1-205ENST00000598209 MCRIP2Q9BUT9 160 aaKnown RBP10.73□□□□□ -0.69
UPF1-205ENST00000598209 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 MEGF8Q7Z7M0 2845 aa10.73□□□□□ -0.69
UPF1-205ENST00000598209 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 C13orf42A0A1B0GVH6 325 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 E7EUB6 86 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 UPK2O00526 184 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 WIPF1O43516 503 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 GSTZ1O43708 216 aaPredicted RBP10.72□□□□□ -0.69
UPF1-205ENST00000598209 BRI3O95415 125 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
UPF1-205ENST00000598209 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 ZNF735P0CB33 412 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 MYOD1P15172 320 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 RPA2P15927 270 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 HLA-GP17693 338 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 PI3P19957 117 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 MEF2DQ14814 521 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 SCGB2B2Q4G0G5 96 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 FOXB2Q5VYV0 432 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 FAAP20Q6NZ36 180 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 TERB2Q8NHR7 220 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 DPF1Q92782 380 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 ZNF486Q96H40 463 aaPredicted RBP10.72□□□□□ -0.69
UPF1-205ENST00000598209 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
UPF1-205ENST00000598209 GPR61Q9BZJ8 451 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 SLC2A9Q9NRM0 540 aa10.72□□□□□ -0.69
UPF1-205ENST00000598209 A0A0G2JLM5 398 aa10.71□□□□□ -0.69
UPF1-205ENST00000598209 A0A1B0GW64 132 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms