RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 EAF1Q96JC9 268 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 RNF5Q99942 180 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 RAB18Q9NP72 206 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 KIAA1456Q9P272 454 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 TMED3Q9Y3Q3 217 aa9.63□□□□□ -0.87
SHKBP1-213ENST00000597325 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 FAM90A9PA6NNJ1 464 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 GOSR2O14653 212 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 SPDEFO95238 335 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 VDAC1P21796 283 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 LGALS7P47929 136 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 RRAS2P62070 204 aaPredicted RBP9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 PLGLAQ15195 96 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 MMDQ15546 238 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 H2BFWTQ7Z2G1 175 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 FAM219AQ8IW50 185 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 OR5R1Q8NH85 324 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 TAF15Q92804 592 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 RHOVQ96L33 236 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 SPIN2AQ99865 258 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 SPIN2BQ9BPZ2 258 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 TMEM140Q9NV12 185 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 C1RLQ9NZP8 487 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 MGAT4CQ9UBM8 478 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 PITPNC1Q9UKF7 332 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 MMP24Q9Y5R2 645 aa9.62□□□□□ -0.87
SHKBP1-213ENST00000597325 CCSO14618 274 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 NBR2O15453 112 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 ADAP1O75689 374 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 SAA1P0DJI8 122 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 MDKP21741 143 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 UBE2KP61086 200 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 EBI3Q14213 229 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 POU2AF1Q16633 256 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 GGNBP1Q5YKI7 109 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 GSG1LQ6UXU4 331 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 Q6YL49 198 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 VKORC1L1Q8N0U8 176 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 SIGLECL1Q8N7X8 197 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 OR8H1Q8NGG4 311 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 SSMEM1Q8WWF3 244 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 LSM10Q969L4 123 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 SEC22AQ96IW7 307 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 PDCD10Q9BUL8 212 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 METTL1Q9UBP6 276 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 TCF19Q9Y242 345 aa9.61□□□□□ -0.87
SHKBP1-213ENST00000597325 DNAH7Q8WXX0 4024 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 A0A1B0GVG6 124 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 DBX1A6NMT0 343 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 SLC25A17O43808 307 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 RBMXL2O75526 392 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 SNAPC5O75971 98 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR2A4O95047 310 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 IER3P46695 156 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 FCN2Q15485 313 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 LY6EQ16553 131 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 BEAN1Q3B7T3 259 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 Q8N6K4 173 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR5M8Q8NGP6 311 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR4A5Q8NH83 315 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 RBMXL1Q96E39 390 aaKnown RBP9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 ZNF48Q96MX3 618 aaPredicted RBP9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 OR2A7Q96R45 310 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 CITED1Q99966 193 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 SLC25A33Q9BSK2 321 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 MOB4Q9Y3A3 225 aa9.6□□□□□ -0.87
SHKBP1-213ENST00000597325 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 SRRM4A7MD48 611 aaKnown RBP9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 M0QZ24 198 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 RRHO14718 337 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 KBTBD11O94819 623 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 OR2F2O95006 317 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 IGLV2-23P01705 113 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 SULT1A3P0DMM9 295 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 SULT1A4P0DMN0 295 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 CNTFRP26992 372 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 PSG5Q15238 335 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 KPRPQ5T749 579 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 C16orf82Q7Z2V1 217 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 CADM3Q8N126 398 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 TEX45Q8NA69 505 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 NPBQ8NG41 125 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 GPR146Q96CH1 333 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 RITA1Q96K30 269 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms