RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 MARCH11A6NNE9 402 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 NQO2P16083 231 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 LGALS7P47929 136 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
TRIM28-207ENST00000597136 F2RL1P55085 397 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 C2orf68Q2NKX9 166 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 VKORC1L1Q8N0U8 176 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 RHOVQ96L33 236 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 AIFM2Q9BRQ8 373 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 MED28Q9H204 178 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 ZNF702PQ9H963 129 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 RAB18Q9NP72 206 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
TRIM28-207ENST00000597136 VWFP04275 2813 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 ADAP1O75689 374 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 ATG12O94817 140 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 IGLV2-23P01705 113 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 HOXB5P09067 269 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 P0C879 139 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 CNTFRP26992 372 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 POU2AF1Q16633 256 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 CADM3Q8N126 398 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 TSNAXQ99598 290 aaKnown RBP11.9□□□□□ -0.5
TRIM28-207ENST00000597136 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
TRIM28-207ENST00000597136 CLPSL1A2RUU4 121 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 VDAC1P21796 283 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 AKR1C2P52895 323 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 ERVK-16P61578 105 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
TRIM28-207ENST00000597136 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
TRIM28-207ENST00000597136 GGNBP1Q5YKI7 109 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 C12orf54Q6X4T0 127 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 DMBX1Q8NFW5 382 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
TRIM28-207ENST00000597136 RRNAD1Q96FB5 475 aaKnown RBP11.89□□□□□ -0.51
TRIM28-207ENST00000597136 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 TMED3Q9Y3Q3 217 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 ANK2Q01484 3957 aa11.89□□□□□ -0.51
TRIM28-207ENST00000597136 A0A0G2JRQ6 117 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 NCBP2LA6PVI3 153 aaKnown RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 HAX1O00165 279 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 IFNA21P01568 189 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SAA1P0DJI8 122 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 HLA-GP17693 338 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 UBE2KP61086 200 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 PSG5Q15238 335 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 FCN2Q15485 313 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 TMEM95Q3KNT9 176 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 C16orf82Q7Z2V1 217 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 NPBQ8NG41 125 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 RNF114Q9Y508 228 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 MMP24Q9Y5R2 645 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 CCSO14618 274 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SLC25A17O43808 307 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 IL6RP08887 468 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SULT1A3P0DMM9 295 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SULT1A4P0DMN0 295 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 PROK1P58294 105 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 MMDQ15546 238 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 IZUMO4Q1ZYL8 232 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 H2BFWTQ7Z2G1 175 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 Q8N9W7 124 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SPATA3Q8NHX4 192 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 GPR146Q96CH1 333 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-207ENST00000597136 SERTAD4Q9NUC0 356 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 TMEM140Q9NV12 185 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 MGAT4CQ9UBM8 478 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 DNHD1Q96M86 4753 aa11.88□□□□□ -0.51
TRIM28-207ENST00000597136 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 MPTX1A8MV57 137 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 GOSR2O14653 212 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 NBR2O15453 112 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 OR2A4O95047 310 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 NDUFA3O95167 84 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 SPDEFO95238 335 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 CRYGBP07316 175 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 CXCL3P19876 107 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 Q6ZRM9 215 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 Q8N2B8 174 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 OR11H7Q8NGC8 314 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 OR8H1Q8NGG4 311 aa11.87□□□□□ -0.51
TRIM28-207ENST00000597136 OR5M8Q8NGP6 311 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms