RNA–Protein interactions for RNA: ENST00000595527.2

TIMM50-205, Transcript of translocase of inner mitochondrial membrane 50, human

Gene TIMM50, Length 2,274 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-205	ENST00000595527	GFRAL	Q6UXV0	394 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	SPNS3	Q6ZMD2	512 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	ZNRF1	Q8ND25	227 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	FAM210B	Q96KR6	192 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	OR2D2	Q9H210	308 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	KCNIP1	Q9NZI2	227 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	RNF115	Q9Y4L5	304 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	PKDREJ	Q9NTG1	2253 aa		10.86	□□□□□ -0.67
TIMM50-205	ENST00000595527	DSCAM	O60469	2012 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	IGLV3-9	A0A075B6K5	115 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	CLDN34	H7C241	214 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	RAMP3	O60896	148 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	TRGC2	P03986	189 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	PAX9	P55771	341 aa		10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	RPL30	P62888	115 aa	Known RBP	10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	CISD1	Q9NZ45	108 aa	Known RBP	10.85	□□□□□ -0.67
TIMM50-205	ENST00000595527	OOEP	A6NGQ2	149 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527		H3BP45	60 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	IGHV3-7	P01780	117 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	SOD3	P08294	240 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	RD3L	P0DJH9	198 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	UTF1	Q5T230	341 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	LCE2A	Q5TA79	106 aa	Predicted RBP	10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	BTNL3	Q6UXE8	466 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	TMEM217	Q8N7C4	229 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	MISP3	Q96FF7	219 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	URGCP-MRPS24	S4R325	110 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	TSTD3	H0UI37	97 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	IFNL4	K9M1U5	179 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	CYB5R3	P00387	301 aa	Predicted RBP	10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	IFNA5	P01569	189 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	S100G	P29377	79 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	BRWD1-AS2	P59051	145 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	STX12	Q86Y82	276 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	C1orf174	Q8IYL3	243 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	OR5R1	Q8NH85	324 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	C14orf144	Q96I85	54 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	P2RX4	Q99571	388 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	GPR61	Q9BZJ8	451 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	CTDSP1	Q9GZU7	261 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	CACNG5	Q9UF02	275 aa		10.84	□□□□□ -0.67
TIMM50-205	ENST00000595527	TRBV24-1	A0A075B6N3	115 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	IGLV1-40	P01703	118 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	TRGC1	P0CF51	173 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	SLC25A6	P12236	298 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	TRAT1	Q6PIZ9	186 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	CHD8	Q9HCK8	2581 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527		A0A1B0GU03	582 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	C15orf65	H3BRN8	121 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	OPN1MW	P04001	364 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	OPN1MW2	P0DN77	364 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	OPN1MW3	P0DN78	364 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	NHLH1	Q02575	133 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	LBH	Q53QV2	105 aa	Predicted RBP	10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	RNASE11	Q8TAA1	199 aa	Known RBP	10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	PITPNC1	Q9UKF7	332 aa		10.83	□□□□□ -0.68
TIMM50-205	ENST00000595527	DPRX	A6NFQ7	191 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	LHB	P01229	141 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	IGHV1-46	P01743	117 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	FAM90A2P	Q658T7	463 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	SSX9	Q7RTT3	188 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	MRGPRG	Q86SM5	289 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	ZNF645	Q8N7E2	425 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	MBD3L1	Q8WWY6	194 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	POLE	Q07864	2286 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	LRBA	P50851	2863 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	C16orf97	H3BN30	126 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	WNT2	P09544	360 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	BCL2	P10415	239 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	DDT	P30046	118 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	CFHR2	P36980	270 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	RUNX1	Q01196	453 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	FGFRL1	Q8N441	504 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	FRZB	Q92765	325 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	RAB40C	Q96S21	281 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	AGMAT	Q9BSE5	352 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	GCM1	Q9NP62	436 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	PSG11	Q9UQ72	335 aa		10.82	□□□□□ -0.68
TIMM50-205	ENST00000595527	LINC00473	A8K010	186 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	C17orf98	A8MV24	154 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	PROP1	O75360	226 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	IAPP	P10997	89 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	RAB11A	P62491	216 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	DEFB108B	Q8NET1	73 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	PACRG	Q96M98	296 aa	Predicted RBP	10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	PSMG3	Q9BT73	122 aa	Predicted RBP	10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	SDF2L1	Q9HCN8	221 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	GNG13	Q9P2W3	67 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	ZNF835	Q9Y2P0	537 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	ODAM	A1E959	279 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	SMCO3	A2RU48	225 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	PHOX2A	O14813	284 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	KRAS	P01116	189 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	FABP4	P15090	132 aa		10.81	□□□□□ -0.68
TIMM50-205	ENST00000595527	PAX1	P15863	534 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms