RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LRRC29Q8WV35 223 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 MAGT1Q9H0U3 335 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 A0A0G2JNJ9 132 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 ADAM20O43506 726 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 GABRA2P47869 451 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 SERF2P84101 59 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 SLC25A24Q6NUK1 477 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 TOMM20LQ6UXN7 152 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 GFRALQ6UXV0 394 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 C1orf174Q8IYL3 243 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 ELOVL1Q9BW60 279 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 Q9UFV3 132 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 KCNS2Q9ULS6 477 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 PPP1R3CQ9UQK1 317 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 WIPI2Q9Y4P8 454 aa14.23□□□□□ -0.13
SHKBP1-205ENST00000594973 SPTA1P02549 2419 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 TMEM30CPA0ZSE6 113 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 NKX6-3A6NJ46 265 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 S100GP29377 79 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 RPL15P61313 204 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 SMIM21Q3B7S5 101 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 SPRNQ5BIV9 151 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 TPTE2P1Q5T6R2 138 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 SCGB1C1Q8TD33 95 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 GSX1Q9H4S2 264 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 PLCE1Q9P212 2302 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 CACNA1DQ01668 2161 aa14.22□□□□□ -0.13
SHKBP1-205ENST00000594973 K7ENP7 123 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 SPRY3O43610 288 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 ZNF737O75373 536 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 NXPH3O95157 252 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 FAM87AP0C7U9 286 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 F2RP25116 425 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 MEF2BQ02080 365 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 OR1L1Q8NH94 360 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 PINX1Q96BK5 328 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 KCNIP1Q9NZI2 227 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 C1QTNF9BB2RNN3 333 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 H0Y980 276 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 CHST1O43916 411 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 IGLV2-14P01704 120 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 BATFQ16520 125 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 NMSQ5H8A3 153 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 FAM53AQ6NSI3 398 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 OR2V2Q96R30 315 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 VAMP8Q9BV40 100 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 PXMP4Q9Y6I8 212 aa14.21□□□□□ -0.13
SHKBP1-205ENST00000594973 RELNP78509 3460 aa14.21□□□□□ -0.14
SHKBP1-205ENST00000594973 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 VENTXO95231 258 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 PSG2P11465 335 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 ZNF16P17020 682 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 EGR1P18146 543 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 GLRXP35754 106 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 PAX9P55771 341 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 TMEM256Q8N2U0 113 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 MRGPRDQ8TDS7 321 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 SNRNP40Q96DI7 357 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 COQ2Q96H96 371 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 NCOR1P1Q9H4R4 102 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 RNF115Q9Y4L5 304 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 CHD3Q12873 2000 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 A0A1W2PN81 502 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 C12orf77C9JDV5 145 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 IFNL4K9M1U5 179 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 IGHV3-13P01766 116 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 SERPINE2P07093 398 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 VDAC1P21796 283 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 CHRNA7P36544 502 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 FGF8P55075 233 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 TPPP2P59282 170 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 MZT1Q08AG7 82 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 OR5D13Q8NGL4 314 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 TRAPPC1Q9Y5R8 145 aa14.2□□□□□ -0.14
SHKBP1-205ENST00000594973 GFRA3O60609 400 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 ESDP10768 282 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 NHLH1Q02575 133 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 PRSS8Q16651 343 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 TMEM41BQ5BJD5 291 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 CD177Q8N6Q3 437 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 CMTM2Q8TAZ6 248 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 GALMQ96C23 342 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 IGHV3OR15-7A0A075B7D8 119 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 PTTG1IPP53801 180 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 EDDM3AQ14507 147 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 SLC35E4Q6ICL7 350 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 MOGAT3Q86VF5 341 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 OR52L2PQ8NGH6 319 aa14.19□□□□□ -0.14
SHKBP1-205ENST00000594973 ROS1P08922 2347 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 CD99P14209 185 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 PRDX2P32119 198 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 SSTR5P35346 364 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 TFPI2P48307 235 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 IL22RA2Q969J5 263 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 RSG1Q9BU20 258 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 PARLQ9H300 379 aa14.18□□□□□ -0.14
SHKBP1-205ENST00000594973 VSIRQ9H7M9 311 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms