RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PROP1O75360 226 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 TNFSF13O75888 250 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 IGHV3-43DP0DP04 118 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
VRK3-209ENST00000594948 RPL19P84098 196 aaKnown RBP10.97□□□□□ -0.65
VRK3-209ENST00000594948 MORN2Q502X0 79 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 Q6ZT83 130 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 PPP1R35Q8TAP8 253 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 TBX15Q96SF7 602 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 DEFB127Q9H1M4 99 aa10.97□□□□□ -0.65
VRK3-209ENST00000594948 OPN3Q9H1Y3 402 aaPredicted RBP10.97□□□□□ -0.65
VRK3-209ENST00000594948 SLC25A10Q9UBX3 287 aaPredicted RBP10.97□□□□□ -0.65
VRK3-209ENST00000594948 PGPEP1LA6NFU8 196 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 ZNF705FA8MVS1 300 aaPredicted RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 F2RL2O00254 374 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 NUPR1O60356 82 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 IL6RP08887 468 aaPredicted RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 OR10J4P0C629 311 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 ZNF705DP0CH99 300 aaPredicted RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 ZNF705BP0CI00 300 aaPredicted RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 TNFSF10P50591 281 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 LGALS4P56470 323 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 ZNF90Q03938 601 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 RAB31Q13636 194 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 MIC13Q5XKP0 118 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 VASH2Q86V25 355 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 Q8TCH9 128 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 CORO2AQ92828 525 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 CBLN4Q9NTU7 201 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 AURKAIP1Q9NWT8 199 aaPredicted RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 CLCF1Q9UBD9 225 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 TP53TG3Q9ULZ0 132 aa10.96□□□□□ -0.65
VRK3-209ENST00000594948 YTHDF2Q9Y5A9 579 aaKnown RBP10.96□□□□□ -0.65
VRK3-209ENST00000594948 IGHV3-64DA0A0J9YX35 117 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 CRISP2P16562 243 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 TEPPQ6URK8 271 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 TCF23Q7RTU1 214 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 CXorf67Q86X51 503 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 CD177Q8N6Q3 437 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 S1PR3Q99500 378 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 CDX2Q99626 313 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 TCF19Q9Y242 345 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 WDR87Q6ZQQ6 2873 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 M0R1X1 148 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 MGST3O14880 152 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 MT-ND6P03923 174 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 PRDX2P32119 198 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 LINC00310P59036 64 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 LINC00205P59089 165 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 RPL31P62899 125 aaKnown RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 EFNB3Q15768 340 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 MBNL2Q5VZF2 373 aaKnown RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 FAM214BQ7L5A3 538 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 OR4S2Q8NH73 311 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 RFESDQ8TAC1 157 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 DDB2Q92466 427 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 WFIKKN1Q96NZ8 548 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 GNB1LQ9BYB4 327 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 TMEM140Q9NV12 185 aa10.95□□□□□ -0.66
VRK3-209ENST00000594948 FOXA2Q9Y261 457 aaPredicted RBP10.95□□□□□ -0.66
VRK3-209ENST00000594948 MED13Q9UHV7 2174 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 C15orf61A6NNL5 157 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 DEFB108AA8MXU0 73 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 K7EN84 100 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 AQP7O14520 342 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 LYZL6O75951 148 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 PRR20EP86478 221 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 PRR20CP86479 221 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 PRR20DP86480 221 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 PRR20BP86481 221 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 PRR20AP86496 221 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 WDR73Q6P4I2 378 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 Q6ZWC4 215 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 TPRX1Q8N7U7 411 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 SDSLQ96GA7 329 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 RAB9BQ9NP90 201 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 GNG12Q9UBI6 72 aa10.94□□□□□ -0.66
VRK3-209ENST00000594948 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 A0A1B0GUS0 222 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 A0A1W2PNU3 283 aaPredicted RBP10.93□□□□□ -0.66
VRK3-209ENST00000594948 CRYABP02511 175 aaKnown RBP10.93□□□□□ -0.66
VRK3-209ENST00000594948 BMP5P22003 454 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 NPY1RP25929 384 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 HOXC12P31275 282 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 CFHR2P36980 270 aa10.93□□□□□ -0.66
VRK3-209ENST00000594948 RAB7AP51149 207 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms