RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 EXOSC2Q13868 293 aaKnown RBP17.92■□□□□ 0.46
LSM4-204ENST00000594828 NECAP1Q8NC96 275 aa17.92■□□□□ 0.46
LSM4-204ENST00000594828 GIMAP1Q8WWP7 306 aa17.92■□□□□ 0.46
LSM4-204ENST00000594828 MEIS3P1A6NDR6 274 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 RPL27AP46776 148 aaKnown RBP17.91■□□□□ 0.46
LSM4-204ENST00000594828 FXYD4P59646 89 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 UBE2NLQ5JXB2 153 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 SSX9Q7RTT3 188 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 SPAG16Q8N0X2 631 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 FYTTD1Q96QD9 318 aaKnown RBP17.91■□□□□ 0.46
LSM4-204ENST00000594828 AIFM2Q9BRQ8 373 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 ZNF257Q9Y2Q1 563 aa17.91■□□□□ 0.46
LSM4-204ENST00000594828 DPPA5A6NC42 116 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 TEX22C9J3V5 150 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 E7EUB6 86 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 H0Y980 276 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 OR2J3O76001 311 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 TNFAIP8O95379 198 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 IL6RP08887 468 aaPredicted RBP17.9■□□□□ 0.46
LSM4-204ENST00000594828 Q8N1Y9 231 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 IFT46Q9NQC8 304 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 SLC2A9Q9NRM0 540 aa17.9■□□□□ 0.46
LSM4-204ENST00000594828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.89■□□□□ 0.45
LSM4-204ENST00000594828 SULT1C2O00338 296 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 CSN3P07498 182 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 ZNF735P0CB33 412 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 RPL8P62917 257 aaKnown RBP17.89■□□□□ 0.45
LSM4-204ENST00000594828 CATR1Q13166 79 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 C15orf32Q32M92 178 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 SAMD12Q8N8I0 201 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 SIGLEC8Q9NYZ4 499 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 PEMTQ9UBM1 199 aa17.89■□□□□ 0.45
LSM4-204ENST00000594828 NPIPB5A8MRT5 1133 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 BMPR1BO00238 502 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 RBFOX2O43251 390 aaKnown RBP eCLIP17.88■□□□□ 0.45
LSM4-204ENST00000594828 TMEM69Q5SWH9 247 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 OR4A47Q6IF82 309 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 OR4A5Q8NH83 315 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 BET1LQ9NYM9 111 aa17.88■□□□□ 0.45
LSM4-204ENST00000594828 HPRT1P00492 218 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 HERV-K104P61576 105 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 FAM209BQ5JX69 171 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 ZNF818PQ6ZRF7 136 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 TMEM17Q86X19 198 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 SGPP2Q8IWX5 399 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 RCHY1Q96PM5 261 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 HRASLSQ9HDD0 168 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 EHFQ9NZC4 300 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 FBXL7Q9UJT9 491 aa17.87■□□□□ 0.45
LSM4-204ENST00000594828 A0A1B0GW64 132 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 CRYGCP07315 174 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 IGHV4-30-4P0DP06 118 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 HLA-GP17693 338 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 PSMB6P28072 239 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 TAS2R31P59538 309 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 TAS2R20P59543 309 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 DHRS11Q6UWP2 260 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 C19orf35Q6ZS72 473 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 BORCS5Q969J3 196 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 KCTD12Q96CX2 325 aaKnown RBP17.86■□□□□ 0.45
LSM4-204ENST00000594828 ZMAT4Q9H898 229 aa17.86■□□□□ 0.45
LSM4-204ENST00000594828 DHFRP00374 187 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 MYOD1P15172 320 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 AREGP15514 252 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 NQO2P16083 231 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 GNRHRP30968 328 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 RFX2P48378 723 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 LCN12Q6JVE5 192 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 Q8N402 240 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 OR51H1Q8NH63 302 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 SLC25A46Q96AG3 418 aa17.85■□□□□ 0.45
LSM4-204ENST00000594828 A8MZ25 164 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 PRSS3P35030 304 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 AADACL3Q5VUY0 350 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 CD300LFQ8TDQ1 290 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 FANCD2OSQ96PS1 177 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 ZNF2Q9BSG1 426 aaPredicted RBP17.84■□□□□ 0.45
LSM4-204ENST00000594828 C19orf73Q9NVV2 129 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 ANAPC10Q9UM13 185 aa17.84■□□□□ 0.45
LSM4-204ENST00000594828 PPP5D1E7EU14 171 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 GGCTO75223 188 aaKnown RBP17.83■□□□□ 0.44
LSM4-204ENST00000594828 NDUFB8O95169 186 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 PMP2P02689 132 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 DEFA4P12838 97 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 CTRB1P17538 263 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 NAT1P18440 290 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 MECP2P51608 486 aaKnown RBP17.83■□□□□ 0.44
LSM4-204ENST00000594828 TAS2R46P59540 309 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 POU2AF1Q16633 256 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 CTRB2Q6GPI1 263 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 OR5H2Q8NGV7 314 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 PLEKHA2Q9HB19 425 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 DMRT1Q9Y5R6 373 aa17.83■□□□□ 0.44
LSM4-204ENST00000594828 CGB1A6NKQ9 187 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 UPK2O00526 184 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 REG1AP05451 166 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 HIST1H1BP16401 226 aaKnown RBP17.82■□□□□ 0.44
LSM4-204ENST00000594828 NCS1P62166 190 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 GTSCR1Q86UQ5 136 aa17.82■□□□□ 0.44
LSM4-204ENST00000594828 DMBX1Q8NFW5 382 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms