RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ZNF251Q9BRH9 671 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 GAB2Q9UQC2 676 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.68
VRK3-205ENST00000593919 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 J3QR06 171 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 IAPPP10997 89 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 BRWD1-AS2P59051 145 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 ARF6P62330 175 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 PRB3Q04118 309 aaPredicted RBP10.77□□□□□ -0.69
VRK3-205ENST00000593919 TMEM267Q0VDI3 215 aaPredicted RBP10.77□□□□□ -0.69
VRK3-205ENST00000593919 SPAG16Q8N0X2 631 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 ABHD12Q8N2K0 398 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 Q8N7P7 452 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 OR9G1Q8NH87 305 aa10.77□□□□□ -0.69
VRK3-205ENST00000593919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.77□□□□□ -0.691e-9■■■■■ 27.5
VRK3-205ENST00000593919 ZANQ9Y493 2812 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 IGHV2-26A0A0B4J1V2 119 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 hCG_1809904A0A1W2PP81 198 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 A0A1W2PR64 198 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 A0A1W2PRV1 198 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 ATP6V0CP27449 155 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 RPL23AP62750 156 aaKnown RBP10.76□□□□□ -0.69
VRK3-205ENST00000593919 NCR3LG1Q68D85 454 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 OR10X1Q8NGY0 326 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 OR2G3Q8NGZ4 309 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 ZNF596Q8TC21 504 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
VRK3-205ENST00000593919 A0A1B0GV50 99 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 M0R1W7 72 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 ENSAO43768 121 aaKnown RBP10.76□□□□□ -0.69
VRK3-205ENST00000593919 SFTA3P0C7M3 94 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 PAX2Q02962 417 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 BAXQ07812 192 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
VRK3-205ENST00000593919 C10orf91Q5T1B1 145 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 S1PR3Q99500 378 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 SIRT7Q9NRC8 400 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 HECTD1Q9ULT8 2610 aa10.76□□□□□ -0.69
VRK3-205ENST00000593919 STRAPQ9Y3F4 350 aaKnown RBP10.76□□□□□ -0.69
VRK3-205ENST00000593919 FAM157AC9JC47 383 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 C9JQL5 133 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 RAB5CP51148 216 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 STX12Q86Y82 276 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 RAB40CQ96S21 281 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 CLEC7AQ9BXN2 247 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 CCDC168Q8NDH2 2452 aa10.75□□□□□ -0.69
VRK3-205ENST00000593919 IGHV2-70DA0A0C4DH43 119 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 TXNL1O43396 289 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 SYNGR2O43760 224 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 S1PR2O95136 353 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 CD5P06127 495 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 PF4V1P10720 104 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 SNCAP37840 140 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 DVL1P1P54792 670 aaPredicted RBP10.74□□□□□ -0.69
VRK3-205ENST00000593919 DSCR9P59020 149 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 RUNX1Q01196 453 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 CLEC12BQ2HXU8 276 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 ZNF833PQ6ZTB9 187 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 DDB2Q92466 427 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 ATP5SQ99766 215 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 PSENENQ9NZ42 101 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 CREBBPQ92793 2442 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 FCGR3BO75015 233 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 FOXH1O75593 365 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 COX7A1P24310 79 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 G6PCP35575 357 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 NPBWR1P48145 328 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 KIR3DL3Q8N743 410 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 LPAR2Q9HBW0 351 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 BEX4Q9NWD9 120 aaPredicted RBP10.74□□□□□ -0.69
VRK3-205ENST00000593919 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
VRK3-205ENST00000593919 ZNF469Q96JG9 3925 aaPredicted RBP10.73□□□□□ -0.69
VRK3-205ENST00000593919 TOR1AO14656 332 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 KRASP01116 189 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 REG1BP48304 166 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 THBS3P49746 956 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 SULT1A1P50225 295 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 PPT1P50897 306 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 ZNF137PP52743 207 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 DIAPH2-AS1Q14236 149 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 GUK1Q16774 197 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 HLA-DRB5Q30154 266 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 TMEM88Q6PEY1 159 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 PNKDQ8N490 385 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 ZNF383Q8NA42 475 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 CD300LFQ8TDQ1 290 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 TNFRSF14Q92956 283 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 ST6GALNAC6Q969X2 333 aa10.73□□□□□ -0.69
VRK3-205ENST00000593919 EIF5A2Q9GZV4 153 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms