RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CDNFQ49AH0 187 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 HACD4Q5VWC8 232 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 SLC16A13Q7RTY0 426 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 TCTEX1D2Q8WW35 142 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 WDR89Q96FK6 387 aaPredicted RBP17.07■□□□□ 0.32
SSBP4-203ENST00000593641 FYTTD1Q96QD9 318 aaKnown RBP17.07■□□□□ 0.32
SSBP4-203ENST00000593641 HSD17B10Q99714 261 aaKnown RBP17.07■□□□□ 0.32
SSBP4-203ENST00000593641 DCSTAMPQ9H295 470 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 ALMS1Q8TCU4 4167 aa17.07■□□□□ 0.32
SSBP4-203ENST00000593641 TRDV1A0A1B0GX56 115 aa17.06■□□□□ 0.32
SSBP4-203ENST00000593641 TEX22C9J3V5 150 aa17.06■□□□□ 0.32
SSBP4-203ENST00000593641 OR2C1O95371 312 aa17.06■□□□□ 0.32
SSBP4-203ENST00000593641 EDN2P20800 178 aa17.06■□□□□ 0.32
SSBP4-203ENST00000593641 SPATA2Q9UM82 520 aa17.06■□□□□ 0.32
SSBP4-203ENST00000593641 IGLV2-14P01704 120 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 IGHV3-23P01764 117 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 MAS1LP35410 378 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 ARL3P36405 182 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 C22orf42Q6IC83 251 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 CNIH2Q6PI25 160 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 GPHB5Q86YW7 130 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 TMEM167AQ8TBQ9 72 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 EEF1AKMT3Q96AZ1 226 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 SLC2A9Q9NRM0 540 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 DMRT1Q9Y5R6 373 aa17.05■□□□□ 0.32
SSBP4-203ENST00000593641 IGKV1D-13A0A0B4J2D9 117 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 SMIM30A4D0T7 59 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 SCGNO76038 276 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 IL6RP08887 468 aaPredicted RBP17.04■□□□□ 0.32
SSBP4-203ENST00000593641 IGKV1-13P0DP09 117 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 GALP22466 123 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 CBLN1P23435 193 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 GNG2P59768 71 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 FAM106AQ4KMX7 169 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 CLEC19AQ6UXS0 136 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 C19orf35Q6ZS72 473 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 PUSL1Q8N0Z8 303 aaKnown RBP17.04■□□□□ 0.32
SSBP4-203ENST00000593641 NUDCD2Q8WVJ2 157 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 VCX3BQ9H321 246 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 TAS2R8Q9NYW2 309 aa17.04■□□□□ 0.32
SSBP4-203ENST00000593641 ZNF320A2RRD8 509 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 TMEM235A6NFC5 223 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 ZNF735P0CB33 412 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 ZNF57Q68EA5 555 aaPredicted RBP17.03■□□□□ 0.32
SSBP4-203ENST00000593641 NR2C2APQ86WQ0 139 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 CACNG8Q8WXS5 425 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 CNBD2Q96M20 576 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 CCDC140Q96MF4 163 aa17.03■□□□□ 0.32
SSBP4-203ENST00000593641 NDUFB8O95169 186 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 HRASP01112 189 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 CRYGCP07315 174 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 DEFA4P12838 97 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 AREGP15514 252 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 HIST1H1BP16401 226 aaKnown RBP17.02■□□□□ 0.32
SSBP4-203ENST00000593641 PSMB6P28072 239 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 OR4A47Q6IF82 309 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 TMEM61Q8N0U2 210 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 MFSD4AQ8N468 514 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 OR52B4Q8NGK2 314 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 FANCD2OSQ96PS1 177 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 ANXA10Q9UJ72 324 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 S4R3C0 116 aa17.02■□□□□ 0.32
SSBP4-203ENST00000593641 NOTOA8MTQ0 251 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 A8MWP6 167 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 E7EUB6 86 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 HSPA13P48723 471 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 RPL8P62917 257 aaKnown RBP17.01■□□□□ 0.31
SSBP4-203ENST00000593641 ZNF66Q6ZN08 573 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 SSX9Q7RTT3 188 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 SELENOKQ9Y6D0 94 aa17.01■□□□□ 0.31
SSBP4-203ENST00000593641 TMEM213A2RRL7 107 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 CTRB1P17538 263 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 EIF4EBP1Q13541 118 aaPredicted RBP17■□□□□ 0.31
SSBP4-203ENST00000593641 ANKRD55Q3KP44 614 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 CTRB2Q6GPI1 263 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 UXS1Q8NBZ7 420 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 AIFM2Q9BRQ8 373 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 GGTLC1Q9BX51 225 aa17■□□□□ 0.31
SSBP4-203ENST00000593641 A0A1B0GW64 132 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 HLA-GP17693 338 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 ARPC4P59998 168 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 IZUMO2Q6UXV1 221 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 CXorf58Q96LI9 332 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 MLXQ9UH92 298 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 DAPK2Q9UIK4 370 aa16.99■□□□□ 0.31
SSBP4-203ENST00000593641 TRBV7-1A0A0A6YYK4 115 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 SCAF4O95104 1147 aaKnown RBP16.98■□□□□ 0.31
SSBP4-203ENST00000593641 REG1AP05451 166 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 BRWD1-AS2P59051 145 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 BTNL8Q6UX41 500 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 OR4A5Q8NH83 315 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 SECTM1Q8WVN6 248 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 GPHA2Q96T91 129 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 HRASLSQ9HDD0 168 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 BET1LQ9NYM9 111 aa16.98■□□□□ 0.31
SSBP4-203ENST00000593641 IGLV11-55A0A075B6I3 123 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 LOC102724200A0A096LPH7 203 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-203ENST00000593641 TNFSF12O43508 249 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 SSX5O60225 188 aa16.97■□□□□ 0.31
SSBP4-203ENST00000593641 KLK9Q2XQG4 91 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms